Jatropha Genome Database

JcCB0551471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0551471.10 - phase: 0 /partial
         (151 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29942.m000735 lipid binding protein, putative                         142   5e-35
28515.m000321 lipid binding protein, putative                          73   6e-14
29703.m001499 lipid binding protein, putative                          71   2e-13
29703.m001495 Nonspecific lipid-transfer protein precursor, puta...    66   5e-12
29844.m003260 Nonspecific lipid-transfer protein A precursor, pu...    56   6e-09
29703.m001498 lipid binding protein, putative                          53   4e-08
29908.m005992 lipid binding protein, putative                          51   2e-07
30131.m006946 lipid binding protein, putative                          49   9e-07
29848.m004680 lipid binding protein, putative                          49   9e-07
30226.m002043 lipid binding protein, putative                          46   6e-06

>29942.m000735 lipid binding protein, putative
          Length = 211

 Score =  142 bits (358), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 75/85 (88%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
           NDC+TPLLNMSDCLSYV E S   VPDKNCCPELAGL+D NPICLCQLLGNS+LTES+G 
Sbjct: 59  NDCLTPLLNMSDCLSYVTESSNVTVPDKNCCPELAGLLDGNPICLCQLLGNSNLTESYGF 118

Query: 118 KININRALKLPSVCGVETPPVSTCA 142
           KI++NRALKLPS+C V TPPVS C+
Sbjct: 119 KIDVNRALKLPSICRVSTPPVSLCS 143


>28515.m000321 lipid binding protein, putative
          Length = 187

 Score = 72.8 bits (177), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 3/84 (3%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
           DC T +LNM+DCLSYV   ST   P+K CC  L  ++ ++  CLC+   +S+     G+ 
Sbjct: 46  DCSTLVLNMADCLSYVSNDSTTTKPEKTCCSGLKTVLKTDAQCLCEAFKSSA---QLGVV 102

Query: 119 ININRALKLPSVCGVETPPVSTCA 142
           +N+ +AL LPS C +  P VS C 
Sbjct: 103 LNVTKALSLPSACKIHAPSVSNCG 126


>29703.m001499 lipid binding protein, putative
          Length = 170

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 4/85 (4%)

Query: 60  CITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIKI 119
           C   L++MS CL+Y+   S+   P   CC +LA +V S P CLC++L   +   S GI +
Sbjct: 31  CTNVLISMSPCLNYITGNSS--TPSSQCCTQLASVVRSQPQCLCEVLNGGA--SSLGINV 86

Query: 120 NINRALKLPSVCGVETPPVSTCAGS 144
           N  +AL LP+ C V+TPP+S C G+
Sbjct: 87  NQTQALALPTTCNVQTPPISRCGGT 111


>29703.m001495 Nonspecific lipid-transfer protein precursor,
           putative
          Length = 207

 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 4/84 (4%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
           + C + + N++ CL+Y+   S+   P  +CC  LA +V S+P CLC LL NS    S GI
Sbjct: 26  SGCNSVVTNLASCLNYITGNSS--TPSASCCSNLANVVQSSPQCLCSLLNNSG--PSLGI 81

Query: 118 KININRALKLPSVCGVETPPVSTC 141
            IN   AL LP  C V+TPP+S C
Sbjct: 82  TINQTLALSLPGACKVQTPPISQC 105


>29844.m003260 Nonspecific lipid-transfer protein A precursor,
           putative
          Length = 164

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 4/84 (4%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
           + C   L++MS CL+Y+   S+   P   CC +L+ +V S+P CLCQ+L  S    S GI
Sbjct: 26  SGCTNVLISMSPCLNYITGNSS--TPSSQCCSQLSSVVRSSPQCLCQVL--SGGGSSLGI 81

Query: 118 KININRALKLPSVCGVETPPVSTC 141
            IN  +AL LP  C V+TPP+S+C
Sbjct: 82  NINQTQALALPGACNVQTPPISSC 105


>29703.m001498 lipid binding protein, putative
          Length = 187

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
           + C + L+ ++ CL+YV     +  P  +CC +LA +V S P CLC +L       S GI
Sbjct: 26  SGCTSALMGLAPCLNYVT--GNSSTPSSSCCSQLATVVQSQPQCLCAMLNGGG--SSLGI 81

Query: 118 KININRALKLPSVCGVETPPVSTC 141
            IN   AL LP  C V+TPPVS C
Sbjct: 82  TINQTLALSLPGACNVQTPPVSQC 105


>29908.m005992 lipid binding protein, putative
          Length = 221

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
           DCIT + +M DCLSY+ + S       +CC     +VD +P C+C+ L   ++    G  
Sbjct: 56  DCITVVADMFDCLSYLGQASNDTKVSSSCCSGFESVVDISPNCVCEGL---NVAVENGYV 112

Query: 119 ININRALKLPSVCGVETP 136
           +N++R + LP  C V  P
Sbjct: 113 LNMSRVMDLPRACKVTIP 130


>30131.m006946 lipid binding protein, putative
          Length = 148

 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 70  CLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIKININRALKLPS 129
           CL+Y+    T  VPD  CC  L  ++ S+P CLC ++ N    ++    IN+  A +LP 
Sbjct: 39  CLNYLN--GTKDVPD-TCCEPLENVIKSDPECLCSMISNEGSDQAEQAGINVTEAQQLPG 95

Query: 130 VCGVETPPVSTCAGS 144
            CG+   P+S   GS
Sbjct: 96  RCGLHVNPISCITGS 110


>29848.m004680 lipid binding protein, putative
          Length = 188

 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 58  NDCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGI 117
            DC   L N++ C+ YV    TAK P   CC +   +  S P CLC L+  S+   S G+
Sbjct: 30  QDCADQLTNLASCIPYVS--GTAKNPTPQCCQDTQKVKASKPKCLCVLIKEST-DPSMGL 86

Query: 118 KININRALKLPSVCGVETPPVSTC 141
            +N   AL +PS C ++   VS C
Sbjct: 87  PVNTTLALHMPSACNIDA-EVSDC 109


>30226.m002043 lipid binding protein, putative
          Length = 133

 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 59  DCITPLLNMSDCLSYVQEPSTAKVPDKNCCPELAGLVDSNPICLCQLLGNSSLTESFGIK 118
           +C   L+ ++ CL YV     AK P  +CC  L  ++ +N  CLC ++ + +     G+K
Sbjct: 15  ECAEQLVGLATCLPYVG--GNAKSPTPDCCTGLKEVLKNNKKCLCVVIKDRN-DPDLGLK 71

Query: 119 ININRALKLPSVCGVETPPVSTC 141
           IN+  AL LP+VC   T  VS C
Sbjct: 72  INVTLALGLPTVCHA-TANVSQC 93