Jatropha Genome Database

JcCB0551271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0551271.10 - phase: 0 /partial
         (209 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002304 phosphoglycerate kinase, putative                       309   6e-85
30169.m006297 phosphoglycerate kinase, putative                       110   4e-25
30169.m006296 phosphoglycerate kinase, putative                       102   1e-22

>30078.m002304 phosphoglycerate kinase, putative
          Length = 678

 Score =  309 bits (792), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 153/209 (73%), Positives = 167/209 (79%)

Query: 1   MEILKKADIXXXXXXXXXXXXVANCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRF 60
           ME L+ ADI            VANC +FAELLSSGVDIFVNDSFSLSHKILASTVA+  F
Sbjct: 182 MEALRIADIFLLENLSEFKEEVANCLRFAELLSSGVDIFVNDSFSLSHKILASTVAVAHF 241

Query: 61  CSACVAGFHFEESLYQMKNAVKMNKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIM 120
           CSA VAGFHFE+SL+Q+K A   NK+PYIAIIGGGNLYDKAA+L  LASKCDGLVFVG+M
Sbjct: 242 CSAHVAGFHFEKSLFQLKKAGTTNKKPYIAIIGGGNLYDKAAALQFLASKCDGLVFVGMM 301

Query: 121 SFQIMHALGYSVPSSLIEPQAHKAALDIIHFAQDRNIPILCPKDFWCVQGFAPKQMEVFP 180
           SFQIMHALGYSVPSSLIEP+AHKAALDIIHFA  RNI IL PKDFWC       +MEV P
Sbjct: 302 SFQIMHALGYSVPSSLIEPKAHKAALDIIHFAHKRNISILYPKDFWCTNAHVMNEMEVVP 361

Query: 181 AHDILKGWSPVDLGPKSLDEIYSLLLKCK 209
           AH +L GW PVDLGP SLDEI +LL+K K
Sbjct: 362 AHHLLDGWLPVDLGPMSLDEINTLLVKSK 390


>30169.m006297 phosphoglycerate kinase, putative
          Length = 479

 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 1/187 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L+S  D++VND+F  +H+  AST  +T+F    VAGF  ++ L  +  AV  
Sbjct: 203 NEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSS 262

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            KRP+ AI+GG  +  K   +  L  KCD L+  G M F    A G SV SSL+E     
Sbjct: 263 PKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLD 322

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSLDEIY 202
            A  ++  A+ + + +L P D      FAP    +V  A  I  GW  +D+GP+S+    
Sbjct: 323 LATSLLAKAKLKGVSLLLPTDVVIADKFAPDANSKVVAASAIPDGWMGLDVGPESVKTFN 382

Query: 203 SLLLKCK 209
             L   K
Sbjct: 383 EALETTK 389


>30169.m006296 phosphoglycerate kinase, putative
          Length = 401

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L+   D++VND+F  +H+  AST  + ++    VAGF  ++ L  +  AV  
Sbjct: 130 NEPEFAKKLAGLADVYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVAN 189

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            K+P+ AI+GG  +  K   +  L  K D L+  G M F    A G+SV SSL+E     
Sbjct: 190 PKKPFAAIVGGSKVSTKIGVIESLLEKVDILILGGGMIFTFYKAQGHSVGSSLVEGDKLD 249

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A  +I  A+ + + +L P D      FA     +V PA  I  GW  +D+GP ++
Sbjct: 250 LASSLIEKAKAKGVDLLLPTDVVIADKFAADANSKVVPASSIPDGWMGLDVGPDAI 305