Jatropha Genome Database

JcCB0550991.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0550991.10 - phase: 0 /partial
         (183 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29962.m000052 conserved hypothetical protein                          256   4e-69

>29962.m000052 conserved hypothetical protein
          Length = 374

 Score =  256 bits (654), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 129/183 (70%), Positives = 148/183 (80%), Gaps = 3/183 (1%)

Query: 1   MERDFLGLNSKEPLAVVKEEVNSDAYKEIGFSKGSGIHWPFSNKVSALPHLNSFKVALED 60
           MERDFLGLN ++ LAVVKEEVNSD YKEIGFSK SGI WPF NKVS+LPHL  FK A ED
Sbjct: 1   MERDFLGLNCQDSLAVVKEEVNSDGYKEIGFSKVSGIQWPFLNKVSSLPHLMPFKAAQED 60

Query: 61  KTKRIVSDSLASPGFLSISTADASDPSQRQFMPEIQKSFNHDRQGGSHFTLTAYPAQHEV 120
           KTKRIVSDS+   GFLSI+T DA DPSQ+Q + EIQ+SFN +RQGG+HFTL +YP QH+V
Sbjct: 61  KTKRIVSDSIVPSGFLSIATVDALDPSQKQ-VAEIQRSFNLERQGGNHFTLASYPLQHDV 119

Query: 121 HSVHHPLDVKMFPVSNHGSLISMAKPFSSKNYYATSSQNMVGNTTKPQLLGGIPVTTPQT 180
           HSVHHP DVK+FPV N+ S IS +  F  KN+YAT+  +MV  TTKPQ LGGIPVT PQT
Sbjct: 120 HSVHHP-DVKVFPVPNYTSSISTSHSF-FKNHYATTGPSMVATTTKPQFLGGIPVTAPQT 177

Query: 181 IIP 183
           I+P
Sbjct: 178 ILP 180