Jatropha Genome Database

JcCB0550651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0550651.10 - phase: 0 /partial
         (91 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000797 3-isopropylmalate dehydratase, putative                 182   4e-47
30008.m000798 3-isopropylmalate dehydratase, putative                 121   7e-29
27777.m000279 aconitase, putative                                      51   9e-08
29784.m000362 aconitase, putative                                      50   2e-07
29600.m000550 aconitase, putative                                      48   8e-07

>30008.m000797 3-isopropylmalate dehydratase, putative
          Length = 510

 Score =  182 bits (461), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 86/91 (94%), Positives = 91/91 (100%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           VPPTLRFVMDGEMPDYLLAKDLILQIIGEISV+GATYKSMEFVGTTVESLNMEERMTLCN
Sbjct: 234 VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVSGATYKSMEFVGTTVESLNMEERMTLCN 293

Query: 61  MVVEAGGKNGVVPADSTTFKYLEDKTSVPYQ 91
           MVVEAGGKNGV+P+DSTTFKYLEDKTSVP++
Sbjct: 294 MVVEAGGKNGVIPSDSTTFKYLEDKTSVPFE 324


>30008.m000798 3-isopropylmalate dehydratase, putative
          Length = 621

 Score =  121 bits (303), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 61/91 (67%), Positives = 65/91 (71%), Gaps = 26/91 (28%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           VPPTLRFV+DGEMPDYLLAKDLILQ                          MEERMTLCN
Sbjct: 371 VPPTLRFVIDGEMPDYLLAKDLILQ--------------------------MEERMTLCN 404

Query: 61  MVVEAGGKNGVVPADSTTFKYLEDKTSVPYQ 91
           MV+EAGGKNGV+PADSTTFKYLEDKTSVPY+
Sbjct: 405 MVIEAGGKNGVIPADSTTFKYLEDKTSVPYE 435


>27777.m000279 aconitase, putative
          Length = 997

 Score = 51.2 bits (121), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F + G++ D + A DL+L +   +   G   K +EF G  ++ L++ +R T+ N
Sbjct: 342 LPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGDGMDELSLADRATIAN 401

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL+
Sbjct: 402 MSPEYGATMGFFPVDHATLQYLK 424


>29784.m000362 aconitase, putative
          Length = 900

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F + G++ D + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 243 LPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATIAN 302

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL+
Sbjct: 303 MSPEYGATMGFFPVDHVTLQYLK 325


>29600.m000550 aconitase, putative
          Length = 997

 Score = 48.1 bits (113), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F + G++ + + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 341 LPGVVGFKLSGKLHNGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMGELSLADRATIAN 400

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL+
Sbjct: 401 MSPEYGATMGFFPVDHVTLQYLK 423