Jatropha Genome Database

JcCB0549911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0549911.10 - phase: 0 
         (139 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29822.m003482 Protein C10orf22, putative                              129   4e-31
48762.m000011 conserved hypothetical protein                          105   5e-24
30072.m000957 conserved hypothetical protein                          100   2e-22
30174.m009040 conserved hypothetical protein                           67   2e-12

>29822.m003482 Protein C10orf22, putative
          Length = 288

 Score =  129 bits (325), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 81/128 (63%), Gaps = 18/128 (14%)

Query: 4   VQKLYDACKESFSTNGP---ISEEALEKVRGILDQMKPSNVGLEQEAQLARQWKASIXXX 60
           VQKLYD CK+ FS  GP    + + +EK+R +LD + P +VGL  E    R   A     
Sbjct: 52  VQKLYDTCKDVFSIGGPGVVPAPDKIEKLRAVLDVITPEDVGLHPEMPYFRLPVAG---- 107

Query: 61  XXXXXXXXSHQYPPTIKYLHLHECDRFSIGIFCMPPSSIIPLHNHPGMTVLSKLLYGSLL 120
                        P I+YLH+HEC++FSIGIFC PPS +IPLHNHPGMTV SKLL+G + 
Sbjct: 108 -----------RAPPIRYLHIHECNKFSIGIFCFPPSGVIPLHNHPGMTVFSKLLFGKMH 156

Query: 121 VKSYDWLD 128
           +KSYDW+D
Sbjct: 157 IKSYDWVD 164


>48762.m000011 conserved hypothetical protein
          Length = 53

 Score =  105 bits (263), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 50/50 (100%), Positives = 50/50 (100%)

Query: 89  IGIFCMPPSSIIPLHNHPGMTVLSKLLYGSLLVKSYDWLDLPGFDDPSQG 138
           IGIFCMPPSSIIPLHNHPGMTVLSKLLYGSLLVKSYDWLDLPGFDDPSQG
Sbjct: 1   IGIFCMPPSSIIPLHNHPGMTVLSKLLYGSLLVKSYDWLDLPGFDDPSQG 50


>30072.m000957 conserved hypothetical protein
          Length = 251

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 81/136 (59%), Gaps = 15/136 (11%)

Query: 3   VVQKLYDACKESFSTNGPIS-EEALEKVRGILDQMKPSNVGLEQEAQLARQWKASIXXXX 61
            +Q+LY +CKE F   G +     +E++  +LD+MKP +VGL    Q   Q K ++    
Sbjct: 47  ALQELYLSCKEVFKGPGTVPLPRDVERLCHLLDKMKPEDVGLSSALQFF-QPKTAV---- 101

Query: 62  XXXXXXXSHQYPPTIKYLHLHECDRFSIGIFCMPPSSIIPLHNHPGMTVLSKLLYGSLLV 121
                    +  P +    +++CD+FS+ IF +P +++IPLHNHPGMTV SKLL G++ +
Sbjct: 102 ---------KCTPRVTTTTIYKCDKFSLCIFFLPATAVIPLHNHPGMTVFSKLLLGTMHI 152

Query: 122 KSYDWLDLPGFDDPSQ 137
           KSYDW+  P  D+P Q
Sbjct: 153 KSYDWVSPPSADEPVQ 168


>30174.m009040 conserved hypothetical protein
          Length = 165

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 33/37 (89%)

Query: 91  IFCMPPSSIIPLHNHPGMTVLSKLLYGSLLVKSYDWL 127
           IFC P SS+IPLH+HPGMTV SKLLYGSL VK+YDW+
Sbjct: 5   IFCFPTSSVIPLHDHPGMTVFSKLLYGSLHVKAYDWV 41