Jatropha Genome Database

JcCB0546741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0546741.10 + phase: 0 
         (516 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29637.m000726 aromatic amino acid decarboxylase, putative             610   e-175
29950.m001181 aromatic amino acid decarboxylase, putative             500   e-142
28725.m000309 aromatic amino acid decarboxylase, putative             381   e-106
60499.m000013 aromatic amino acid decarboxylase, putative             306   2e-83
27544.m000014 aromatic amino acid decarboxylase, putative             207   7e-54
29439.m000226 hypothetical protein                                     95   7e-20

>29637.m000726 aromatic amino acid decarboxylase, putative
          Length = 492

 Score =  610 bits (1574), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 280/496 (56%), Positives = 364/496 (73%), Gaps = 12/496 (2%)

Query: 18  KQEAMNPLNSDEFRRQAHMIVDFIADYYQNIEKYPVLSQVEPGYLRNCLPNSAPSHPESI 77
           ++  + P+++++ R   H +VDFIADYY+ IE +PVLSQVEPGYLR  LP+SAP+ PES+
Sbjct: 3   REGELRPMDAEQLREHGHKMVDFIADYYKTIENFPVLSQVEPGYLRKLLPDSAPNQPESL 62

Query: 78  ETILQDVGKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMSSPAATE 137
           + +L DV   I+PG+THWQSPNYFAY+PS+ S+A FLGEMLS G N+VGF+W++SPAATE
Sbjct: 63  QNVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGINMVGFSWITSPAATE 122

Query: 138 LESIVMDWLGQMLELPSRFLFSGNGGGVIHGTTCEAILCTLIAARDQTLGRIGKSNITKL 197
           LE IV+DWLG+ML+LP  FL +G GGGVI GT  EA+L  L+AARD+ L R+GK  + KL
Sbjct: 123 LEMIVLDWLGKMLKLPEEFLSTGQGGGVIQGTASEAVLVALVAARDKVLRRVGKDALRKL 182

Query: 198 VVYGSDQTHSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEKGLIPLF 257
           VVYGSDQTHSA QKA +I GI P N R ++T  ST +AL+PDLL  +I  DI  GLIP F
Sbjct: 183 VVYGSDQTHSALQKACQIGGIHPVNCRLLETDSSTNYALAPDLLSRAISEDISLGLIPFF 242

Query: 258 LCXXXXXXXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLDGLEEANSFS 317
           LC           DP+  L  +AK   +W HVDAAYAG+AC+CPE++ ++DG+EEA+SF+
Sbjct: 243 LCATVGTTSSTAVDPLLALGKIAKSNGMWFHVDAAYAGSACVCPEYRCYMDGVEEADSFN 302

Query: 318 LNAHKWLFTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIALSRRFR 377
           +NAHKW  TN DC  LWVKD   L QSLST+PEFL+NK S +  VVDYKDWQI L RRFR
Sbjct: 303 MNAHKWFLTNFDCSALWVKDRNALIQSLSTSPEFLQNKPSQTNTVVDYKDWQIPLGRRFR 362

Query: 378 SMKLWLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFRILAEAI 437
           S+KLW+VLR YGV  L+ ++R HI +AK FEGL+ ED RFE+V P  FA+VCFR+L    
Sbjct: 363 SLKLWMVLRLYGVEKLQCYIRNHINLAKYFEGLIAEDTRFEVVSPPIFALVCFRLLPP-- 420

Query: 438 EIGKNGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGATLTEDRH 497
                      N+    N+L+  LL+++N++G I++SH ++ G Y +RFAVGA LTE+RH
Sbjct: 421 ----------DNNVDHGNKLSHDLLDAVNSTGKIFISHTVLSGKYILRFAVGAPLTEERH 470

Query: 498 VIMAWKVIKEHANAIL 513
           V  AWKV+++ A A+L
Sbjct: 471 VTAAWKVLQDEACALL 486


>29950.m001181 aromatic amino acid decarboxylase, putative
          Length = 445

 Score =  500 bits (1288), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 235/417 (56%), Positives = 311/417 (74%), Gaps = 13/417 (3%)

Query: 97  SPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMSSPAATELESIVMDWLGQMLELPSRF 156
           SPN+FAYF ++ S A FLGEML +G NVVGFNW+SSPAATELES+V+DW+G +++LPS F
Sbjct: 40  SPNFFAYFQANASNAGFLGEMLCSGLNVVGFNWISSPAATELESLVVDWMGNLMKLPSSF 99

Query: 157 LFSGNGGGVIHGTTCEAILCTLIAARDQTLGRIGKSNITKLVVYGSDQTHSAFQKAAKIA 216
           LFSGNGGGV+HG+TCEAI+CTL+AARD+ L R+G   ITKLVVY SDQTH+  QK  +I 
Sbjct: 100 LFSGNGGGVLHGSTCEAIICTLVAARDRALKRLGWDKITKLVVYASDQTHATLQKGTRIV 159

Query: 217 GIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEKGLIPLFLCXXXXXXXXXXXDPIRPL 276
           GI   N R++ T+ S+ F+LS   L+ +I +DI+ GL+P+FLC           DPI  L
Sbjct: 160 GIPFSNIRSLPTSYSSGFSLSSRTLQEAIENDIKSGLVPIFLCATVGTTTCGAVDPIEEL 219

Query: 277 CNVAKEYSIWVHVDAAYAGNACICPEFQHFLDGLEEANSFSLNAHKWLFTNLDCCCLWVK 336
             +A +Y +W H+DAAYAG+ACICPEF+++L+G+E A+S S+N HKW  TN+DCCCLWVK
Sbjct: 220 GKIATKYDLWFHIDAAYAGSACICPEFRNYLNGVELADSISMNPHKWFLTNMDCCCLWVK 279

Query: 337 DPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIALSRRFRSMKLWLVLRSYGVSNLRKF 396
            P  L  SLST PE+LRN AS+S+ V+DYKDWQIALSRRFR++KLW+V+R +G++ L   
Sbjct: 280 QPDFLVDSLSTKPEYLRNTASESSAVIDYKDWQIALSRRFRAIKLWVVIRRHGLATLMHH 339

Query: 397 LRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFRILAEAIEIGKNGVQILPNHETLANE 456
           +R  + MAK FE LV  DKRFEIVVPR FA+VCFR+  +    G N           ++E
Sbjct: 340 IRSDVNMAKRFESLVANDKRFEIVVPRKFALVCFRLKPKD---GANS----------SDE 386

Query: 457 LNRKLLESINASGCIYMSHAMVEGVYFIRFAVGATLTEDRHVIMAWKVIKEHANAIL 513
           LNR+LL  +N SGC +++H +  G+YFIR A+G+TLTE+RHV   WK+I+E A+++L
Sbjct: 387 LNRRLLAMVNQSGCAFLTHGVAGGIYFIRCAIGSTLTEERHVDDLWKLIQEKAHSML 443


>28725.m000309 aromatic amino acid decarboxylase, putative
          Length = 316

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 173/322 (53%), Positives = 227/322 (70%), Gaps = 10/322 (3%)

Query: 192 SNITKLVVYGSDQTHSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEK 251
           S +T LVVY SDQTHS F KA K+AG++P N R + T+  TAF+LSP  LR +I+ D+  
Sbjct: 2   SKLTALVVYASDQTHSTFSKACKLAGLNPSNIRLLPTSLDTAFSLSPSTLRKAIQDDVAS 61

Query: 252 GLIPLFLCXXXXXXXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLDGLE 311
           GL+PL+LC           DP+  L +VA EY +W+H+DAAY G+ACICPEF+ +LDG+E
Sbjct: 62  GLVPLYLCVTVGTTSTTAIDPVGQLADVANEYDMWIHIDAAYGGSACICPEFRGYLDGVE 121

Query: 312 EANSFSLNAHKWLFTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIA 371
             +S SL+ HKWL + LDCCCLWVK P  L Q+LSTNPE+L+NK S+S  VVD+KDWQ+ 
Sbjct: 122 RVDSLSLSPHKWLLSYLDCCCLWVKSPNLLVQALSTNPEYLKNKQSESDSVVDFKDWQVG 181

Query: 372 LSRRFRSMKLWLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFR 431
             RRF+S++LWL+LRSYGVSNL+  +R  ++MAK+FEG V  D RFEI+ PR FA+VCFR
Sbjct: 182 TGRRFKSLRLWLILRSYGVSNLQGHIRSDVQMAKIFEGFVKSDPRFEIMTPRTFALVCFR 241

Query: 432 ILAEAIEIGKNGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGAT 491
           +       G    ++          +N KLLE +N+SG IYM+H  V G Y +RFAVG T
Sbjct: 242 LKPTHKLDGSKHTEM----------MNGKLLEWVNSSGRIYMTHTKVGGEYLLRFAVGTT 291

Query: 492 LTEDRHVIMAWKVIKEHANAIL 513
           LTE+RHV+ AWK+IKE A+ +L
Sbjct: 292 LTEERHVVSAWKLIKEGADVLL 313


>60499.m000013 aromatic amino acid decarboxylase, putative
          Length = 239

 Score =  306 bits (783), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 145/239 (60%), Positives = 183/239 (76%)

Query: 36  MIVDFIADYYQNIEKYPVLSQVEPGYLRNCLPNSAPSHPESIETILQDVGKHIVPGITHW 95
           M++DFIA+YY+NIEKYPV SQV+PGYL   LP SAP  PESIE IL+D+   I+PG+THW
Sbjct: 1   MVIDFIAEYYKNIEKYPVQSQVQPGYLSTKLPKSAPYCPESIEDILKDISDSIIPGLTHW 60

Query: 96  QSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMSSPAATELESIVMDWLGQMLELPSR 155
           QSPN+FAYF  + S A FLGEML +G NVVGFNW+SSPAATELES+V+DW+G +++LPS 
Sbjct: 61  QSPNFFAYFQINASNAGFLGEMLCSGLNVVGFNWISSPAATELESLVVDWMGNLMKLPSS 120

Query: 156 FLFSGNGGGVIHGTTCEAILCTLIAARDQTLGRIGKSNITKLVVYGSDQTHSAFQKAAKI 215
           FLFSGNGGGV+HG+TCEAI+CTL+AARD+ L R+G   ITKLVVY SDQTH+  QK  +I
Sbjct: 121 FLFSGNGGGVLHGSTCEAIICTLVAARDRALKRLGWDKITKLVVYASDQTHATLQKGTRI 180

Query: 216 AGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEKGLIPLFLCXXXXXXXXXXXDPIR 274
            GI   N R++ T+ S+ F+LS   L+ +I +DI+ GL+P+FLC           DPI 
Sbjct: 181 VGIPFSNIRSLPTSYSSGFSLSSRTLQEAIENDIKSGLVPIFLCATVGTTTCGAVDPIE 239


>27544.m000014 aromatic amino acid decarboxylase, putative
          Length = 174

 Score =  207 bits (528), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 99/187 (52%), Positives = 132/187 (70%), Gaps = 13/187 (6%)

Query: 328 LDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIALSRRFRSMKLWLVLRS 387
           +DCCCLWVK P  L  SLS  PE+LRN AS+S  V+DYKDWQIALSRRFR++KLW+V+R 
Sbjct: 1   MDCCCLWVKQPDSLVDSLSIEPEYLRNTASESGAVIDYKDWQIALSRRFRAIKLWVVIRR 60

Query: 388 YGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFRILAEAIEIGKNGVQIL 447
           +G++ L   +R  + MAK FE LV  DKRFEIVVPR FA+VCFR+  +    G N     
Sbjct: 61  HGLATLMHHIRSDVNMAKRFESLVANDKRFEIVVPRKFALVCFRLKPKD---GANS---- 113

Query: 448 PNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGATLTEDRHVIMAWKVIKE 507
                 ++ELNR+LL  +N SG  +++H +  G+YFIR A+G+TLTE+RHV   WK+I+E
Sbjct: 114 ------SDELNRRLLAMVNQSGRAFLTHGVAGGIYFIRCAIGSTLTEERHVDDLWKLIQE 167

Query: 508 HANAILG 514
            A+++L 
Sbjct: 168 KAHSMLS 174


>29439.m000226 hypothetical protein
          Length = 58

 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 41/58 (70%), Positives = 52/58 (89%)

Query: 117 MLSTGFNVVGFNWMSSPAATELESIVMDWLGQMLELPSRFLFSGNGGGVIHGTTCEAI 174
           MLS G N+VGFNW+SSPAATELES +++W+  +L+LPS FLFSGNGGGV+HG+TC+AI
Sbjct: 1   MLSLGLNIVGFNWISSPAATELESPIVNWMANLLKLPSSFLFSGNGGGVLHGSTCKAI 58