Jatropha Genome Database

JcCB0545911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0545911.10 - phase: 0 /partial
         (102 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30115.m001181 conserved hypothetical protein                          153   1e-38
29801.m003204 conserved hypothetical protein                           97   2e-21
29904.m002958 conserved hypothetical protein                           81   1e-16
30204.m001765 conserved hypothetical protein                           65   6e-12

>30115.m001181 conserved hypothetical protein
          Length = 219

 Score =  153 bits (387), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/102 (75%), Positives = 89/102 (87%), Gaps = 3/102 (2%)

Query: 4   SVEVETSVYYSCRERRETTPSSQLRPESSDELDSIARPSP-EANTLRRS--TAEKMPTES 60
           S EVETSVYYSCRERRE+TPSS++  E SDELDS ARPS  EAN+ R+   T EKMPTE+
Sbjct: 118 SAEVETSVYYSCRERRESTPSSEVGEELSDELDSTARPSAMEANSRRKPSLTVEKMPTET 177

Query: 61  ELDEFFTEAEKSIQKQFAEKYNYDIVKDEPLEGRYEWVRLKP 102
           ELDEFF EAE++IQK+FA+KYNYD+VKDEPL+GRYEWVRLKP
Sbjct: 178 ELDEFFAEAERNIQKRFADKYNYDVVKDEPLKGRYEWVRLKP 219


>29801.m003204 conserved hypothetical protein
          Length = 202

 Score = 96.7 bits (239), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 6/86 (6%)

Query: 19  RETTPSSQLRPESSDELDSIARPSPEANTLR--RSTAEKMPTESELDEFFTEAEKSIQKQ 76
           RET+PSS    ++ DE++S   P+P     R  R  AEK+P++ E+DEFF EAEK  QK+
Sbjct: 121 RETSPSSSFYGDT-DEMES---PAPVVKNCRKIRLPAEKVPSQVEIDEFFAEAEKKEQKR 176

Query: 77  FAEKYNYDIVKDEPLEGRYEWVRLKP 102
           FA+KYNYDIVKD PLEGRY+WVRLKP
Sbjct: 177 FADKYNYDIVKDLPLEGRYQWVRLKP 202


>29904.m002958 conserved hypothetical protein
          Length = 266

 Score = 81.3 bits (199), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 8/88 (9%)

Query: 19  RETTPSSQLR-PESSDELDSIARPS---PEANTLRRSTAEKMPTESELDEFFTEAEKSIQ 74
           RE+TP S +R PES     S  RPS   P   ++RR     +PT  E+DEFFT AE+  Q
Sbjct: 183 RESTPCSLIRDPESIRTPGSTTRPSSTEPNRTSMRR----HIPTAHEMDEFFTGAEEEQQ 238

Query: 75  KQFAEKYNYDIVKDEPLEGRYEWVRLKP 102
           K+F EKYN+D V D+PL GRYEW +L P
Sbjct: 239 KRFIEKYNFDPVNDKPLAGRYEWAKLDP 266


>30204.m001765 conserved hypothetical protein
          Length = 239

 Score = 65.1 bits (157), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 18/98 (18%)

Query: 16  RERRETTPSSQLRPESSDELDSIARPSPEANT-----------LRRSTAEKMPTESELDE 64
           R  RE+TP + ++       DS A  +P + T           +R +    +PT  E++E
Sbjct: 149 RSTRESTPCNLIK-------DSDATGTPCSTTGQASSTATNRRVRNNIQRSIPTTHEMEE 201

Query: 65  FFTEAEKSIQKQFAEKYNYDIVKDEPLEGRYEWVRLKP 102
           FFT AE+  ++ F EKYN+D+  D PL GRYEWV++ P
Sbjct: 202 FFTCAEQRQRRLFIEKYNFDVANDLPLPGRYEWVQVIP 239