Jatropha Genome Database

JcCB0545461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0545461.10 - phase: 0 /partial
         (264 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28153.m000283 glutathione peroxidase, putative                        248   2e-66
29799.m000637 conserved hypothetical protein                           61   6e-10

>28153.m000283 glutathione peroxidase, putative
          Length = 1558

 Score =  248 bits (633), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/271 (53%), Positives = 176/271 (64%), Gaps = 27/271 (9%)

Query: 5   SERLQLRDVGAEY----IGSSEHSQLIPALISHADEASKVTSQNGSNVLQYSAEDTGCEN 60
           +E  +LR  G E     +  SE S+L  +LIS A+E +K TS NGS+ LQ +A+DT CEN
Sbjct: 663 AEDAELRVAGGENRVEDVSISESSRLNASLISLANEGTKGTSLNGSDALQNTADDTACEN 722

Query: 61  TESLRSPIHGNNQVDGMSEEAKGLKYEKRRKEASYASISDHHLHHSGVLVAQSSPVPADG 120
           TE+LR+ +  N++ +G+            RKE+ YAS S+ HL     L   SSPVPADG
Sbjct: 723 TETLRTQVDDNSRDNGI------------RKESCYASSSEDHLGGRDGLGVGSSPVPADG 770

Query: 121 XXXXXXXXXXXXXXCHVSTSESANFVQHSGCSTPNHSHQKTTVCTS-VEEEKIELLVPQL 179
                         CHVST+ESANF+Q+SGCS+PNHS QKTTVCTS V+EEKIE + PQ 
Sbjct: 771 MESPAQTSPPTTSICHVSTAESANFIQNSGCSSPNHSQQKTTVCTSVVDEEKIESVAPQR 830

Query: 180 AKSAGRWSNYAEAHAALSSFEGTLGSFDQDKGEHRSSNS----------HSHVVEILARH 229
            KS G+WS+YAEAHAALSSFEG LGS  + K     +             + VV+ILAR 
Sbjct: 831 PKSVGKWSSYAEAHAALSSFEGMLGSLTRTKESIGRATRIAIDCAKFGVSAKVVDILART 890

Query: 230 LESESSLHRRVDLFFLVDSITQCSRGLKGKV 260
           LESES+LHRRVDLFFLVDSITQCSRGLKG V
Sbjct: 891 LESESNLHRRVDLFFLVDSITQCSRGLKGDV 921


>29799.m000637 conserved hypothetical protein
          Length = 1425

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 16/90 (17%)

Query: 182 SAGRWSNYAEAHAALSSFEGTLGSFDQDK-------------GEHRSSNSHSHVVEILAR 228
           + G  S   EA  A  +FEG + +  + K              ++  +N    VVE+L R
Sbjct: 802 AGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIAN---EVVELLIR 858

Query: 229 HLESESSLHRRVDLFFLVDSITQCSRGLKG 258
            LE E S HR+VDLFFLVDSITQCS   KG
Sbjct: 859 KLEIEPSFHRKVDLFFLVDSITQCSHNQKG 888