Jatropha Genome Database

JcCB0544731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0544731.10 - phase: 2 /pseudo/partial
         (235 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29772.m000318 cysteine desulfurylase, putative                        203   5e-53
30136.m001038 cysteine desulfurylase, putative                        180   6e-46

>29772.m000318 cysteine desulfurylase, putative
          Length = 598

 Score =  203 bits (517), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/250 (46%), Positives = 145/250 (58%), Gaps = 15/250 (6%)

Query: 1   IEKQENNYIEKALERLKSNKNIWVLGKNNSKRKKETSYILLPHIFYNYXXXIFRGKRGEE 60
           IE+QE+ Y+ KAL+RLK NKNI +LG  ++KR+   S+++      +        ++ E+
Sbjct: 349 IEEQEHKYLSKALKRLKYNKNIGILGNISAKRQAILSFLIFSTTNSSSSKDPSSERKEED 408

Query: 61  DLNMWAETETKEIXXXXXXXXXXXXXXXXXXXXEVGVPVLVLMVIFLLNINQTTSLAIRS 120
           +L MWAET  K                        G          LLNI++T SLA+RS
Sbjct: 409 NLYMWAETGNKRDKPLHGAFVAALLNDLFGIQSRGGCACAGPYGHLLLNISETVSLALRS 468

Query: 121 AIQKGYVGVKPGWTRISFPYYMSEEEFEFILAAVEFIAIYGQRFLPLYHFNWKNGNWTXX 180
           AI +GY+GVKPGWTRISFPYYMS EEFEFI+AAVEFIAIYGQRFLPLY FN+K G W+  
Sbjct: 469 AIHQGYMGVKPGWTRISFPYYMSNEEFEFIIAAVEFIAIYGQRFLPLYRFNFKTGAWSFK 528

Query: 181 XXXXXXXXX----XCG-----------GRIFNKHTSYLEMAKNIANLLPKFPSQRKLPED 225
                         C            G + +K  SYL+ A +IANLLPKFP  RKLP+ 
Sbjct: 529 KKANKDLVVGKENSCNAFPLAGAAKDNGEVMDKQASYLKSAIHIANLLPKFPPPRKLPQG 588

Query: 226 LDHNLLXFRV 235
           LDHNLL FRV
Sbjct: 589 LDHNLLYFRV 598


>30136.m001038 cysteine desulfurylase, putative
          Length = 633

 Score =  180 bits (456), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 102/141 (72%), Gaps = 12/141 (8%)

Query: 107 LLNINQTTSLAIRSAIQKGYVGVKPGWTRISFPYYMSEEEFEFILAAVEFIAIYGQRFLP 166
           LL+I++  SLA+RSAI +GY+G KPGWTRISFPYYMS +EFEFI+AAVEF+AIYGQRFLP
Sbjct: 493 LLDISEANSLALRSAIHQGYMGAKPGWTRISFPYYMSNQEFEFIMAAVEFVAIYGQRFLP 552

Query: 167 LYHFNWKNGNW------------TXXXXXXXXXXXXCGGRIFNKHTSYLEMAKNIANLLP 214
           LY FN+K G W                          GG I NK+ SYLE+AK+IANLLP
Sbjct: 553 LYGFNFKTGTWYFKKKAFKDLLVGKENKCNTFPMAAVGGEIINKYASYLEIAKHIANLLP 612

Query: 215 KFPSQRKLPEDLDHNLLXFRV 235
           KFPS RKLPEDLD+NLL FRV
Sbjct: 613 KFPSSRKLPEDLDYNLLYFRV 633



 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 33/40 (82%)

Query: 1   IEKQENNYIEKALERLKSNKNIWVLGKNNSKRKKETSYIL 40
           IE+QE NYI KALER+KSNKNIW+LG  +++R+   S+++
Sbjct: 394 IEEQEKNYISKALERVKSNKNIWILGNTSAERQAILSFLI 433