Jatropha Genome Database

JcCB0544161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0544161.10 + phase: 0 
         (443 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29576.m000226 transcription factor, putative                          657   0.0  
29576.m000233 transcription factor, putative                          623   e-179
30169.m006420 transcription factor, putative                          266   1e-71
29815.m000502 conserved hypothetical protein                          217   7e-57

>29576.m000226 transcription factor, putative
          Length = 445

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/443 (72%), Positives = 365/443 (82%), Gaps = 4/443 (0%)

Query: 1   MEGNLSRGCMLPGGSPFGGLDLEGAVRIHHQTQYPHAIHNQQRPIHRQGSSVHPSIHEGF 60
           MEGNLS+G MLPGG+PFGGLDL+G++ +HHQTQY HA+H Q   +HRQGS++HPSI EGF
Sbjct: 1   MEGNLSQGNMLPGGTPFGGLDLQGSLSVHHQTQYQHAVH-QPHHVHRQGSAIHPSIREGF 59

Query: 61  PLTIGALNNSDQTISKTNYNKGEKMKNSASDEDEPSYTEDDGNGHSE---GKKGLPWQRV 117
           PLTIG +NNSDQ +S TNYN G+K K S SDEDEPSY+ED  +G +E   GKKG PW+RV
Sbjct: 60  PLTIGTMNNSDQNMSLTNYNTGDKGKISTSDEDEPSYSEDGVDGQNEASRGKKGSPWRRV 119

Query: 118 KWTDKMVRLLITAVSYIGEDMSSDGDGGVRRKLAILQKKGKWKLISKVMAERGFHVSRQQ 177
           KWTDKMVRLLITAVSYIGEDMSSD +GG+RRK A+LQ+KGKWKL+SK MAERGFHVS QQ
Sbjct: 120 KWTDKMVRLLITAVSYIGEDMSSDCNGGIRRKFAVLQRKGKWKLVSKAMAERGFHVSPQQ 179

Query: 178 CEDKFNDLNKRYKKLNDMLGRGTSCEVVENPALLVHIDYLTEKEKDDVRKILSSKHLFYE 237
           CEDKFNDLNKRYK+LND+LGRGTSC+VVENPALL  ID+LTEK KDDVRKILSSKHLFYE
Sbjct: 180 CEDKFNDLNKRYKRLNDILGRGTSCQVVENPALLDVIDFLTEKAKDDVRKILSSKHLFYE 239

Query: 238 EMCSYHNSNRLHLPHDPALQHSLQLALRSKDDHDNDDIQRNQKYDLDEDDQEVETDDHDE 297
           EMCSYHN NRLHLPHDPALQHSLQLALR K+DHDNDD++RNQ  DL+EDDQEVET+D DE
Sbjct: 240 EMCSYHNDNRLHLPHDPALQHSLQLALRRKEDHDNDDMRRNQHDDLEEDDQEVETEDRDE 299

Query: 298 FEEKHPSHGNDRGIYGVLGGSMKRLRHGRGCKDSCFWNPSQDGNKGSYPHLQIAQVDMNQ 357
            E+   S  + +GI G LGGSMKR RH +G  D+CF   SQD  KGSY HLQI QVD+NQ
Sbjct: 300 VEDNLISRRDGKGIDGALGGSMKRFRHAQGHVDACFRISSQDNVKGSYSHLQIPQVDINQ 359

Query: 358 MSTESTKAAWLHKQWMESQTXXXXXXXXXXXXXXXXXXXXRFKWKRFSRKRDHELEKLRV 417
           MS+EST+AA L KQWMES T                    RFKWKRFSRKRDHELEKLR+
Sbjct: 360 MSSESTRAALLQKQWMESCTLQLEEQKLQIQLEMLELEKQRFKWKRFSRKRDHELEKLRL 419

Query: 418 ENERMKLENERIALELKRKEMGI 440
           ENERMKLENER+ALELKRKEM +
Sbjct: 420 ENERMKLENERMALELKRKEMVV 442


>29576.m000233 transcription factor, putative
          Length = 441

 Score =  623 bits (1606), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 316/447 (70%), Positives = 356/447 (79%), Gaps = 10/447 (2%)

Query: 1   MEGNLSRGCMLPGGSPFGGLDLEGAVRIHHQTQYPHAIHNQQR-PIHRQGSSVHPSIHEG 59
           MEGNLS+G +      FGG DL+G+ R+HH  +      + Q+ P+HRQGSSV PS HEG
Sbjct: 1   MEGNLSQGGI------FGGFDLQGSTRVHHHQEQHQHAVHHQQNPLHRQGSSVQPSTHEG 54

Query: 60  FPLTIGALNNSDQTISKTNYNKGEKMKNSASDEDEPSYTEDDGNGH---SEGKKGLPWQR 116
           FPL +G + NSDQ IS T+YNKG+K KNSASDEDEPSYTED  +GH   S GKKG PWQR
Sbjct: 55  FPLAMGTMRNSDQIISMTDYNKGDKGKNSASDEDEPSYTEDGADGHNDPSRGKKGSPWQR 114

Query: 117 VKWTDKMVRLLITAVSYIGEDMSSDGDGGVRRKLAILQKKGKWKLISKVMAERGFHVSRQ 176
           VKWTDKMVRLLITAVSYIGED++SD   G+RRK ++LQKKGKWK +SKVMAERG  VS Q
Sbjct: 115 VKWTDKMVRLLITAVSYIGEDVTSDYGSGMRRKFSVLQKKGKWKSVSKVMAERGHLVSPQ 174

Query: 177 QCEDKFNDLNKRYKKLNDMLGRGTSCEVVENPALLVHIDYLTEKEKDDVRKILSSKHLFY 236
           QCEDKFNDLNKRYKKLNDMLGRGTSC+VVENPALL  IDYLTEKEKDDVRKILSSKHLFY
Sbjct: 175 QCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDYLTEKEKDDVRKILSSKHLFY 234

Query: 237 EEMCSYHNSNRLHLPHDPALQHSLQLALRSKDDHDNDDIQRNQKYDLDEDDQEVETDDHD 296
           EEMCSYHN NRLHLPHDPALQ SLQLALRSKD HDNDD++R+Q  D+DEDDQEVETDDHD
Sbjct: 235 EEMCSYHNGNRLHLPHDPALQRSLQLALRSKDGHDNDDVRRHQHDDMDEDDQEVETDDHD 294

Query: 297 EFEEKHPSHGNDRGIYGVLGGSMKRLRHGRGCKDSCFWNPSQDGNKGSYPHLQIAQVDMN 356
           EF E   SHG  RGI+G+LGGS KRLR G+G +D CF N SQDGNKGS+ + QI++VDMN
Sbjct: 295 EFAETQASHGESRGIHGLLGGSAKRLRQGQGHEDVCFVNSSQDGNKGSHSNFQISEVDMN 354

Query: 357 QMSTESTKAAWLHKQWMESQTXXXXXXXXXXXXXXXXXXXXRFKWKRFSRKRDHELEKLR 416
           Q S E TKAAWL KQWMES+                     RFKW+RFSRKRD ELEKLR
Sbjct: 355 QNSPECTKAAWLQKQWMESRALQLEEQKLQIQIETLELEKQRFKWQRFSRKRDRELEKLR 414

Query: 417 VENERMKLENERIALELKRKEMGIVFN 443
           +ENERMKLENER+ALELK+KE+ + FN
Sbjct: 415 MENERMKLENERMALELKQKEISVDFN 441


>30169.m006420 transcription factor, putative
          Length = 454

 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 176/441 (39%), Positives = 249/441 (56%), Gaps = 49/441 (11%)

Query: 15  SPFGGL-DLEGAVRIHHQTQYPHAIHNQQRPIHRQGSSVHPSIHEGF-----PLTIGALN 68
           SP GGL DLE  +    Q Q  H+    QR         H ++  G      P+ +  + 
Sbjct: 13  SPVGGLLDLESPIHRQQQAQSGHSSLAHQR---------HMNLISGLGNDHQPIGLMEVK 63

Query: 69  NSDQTISKTNYNKGEKMK-------NSASDEDEPSYTEDDGNGHSEG---KKGLPWQRVK 118
            S      TN +KG+ +         + S++DEPS+TED    +S G   KKG PWQR+K
Sbjct: 64  GSSPRNYSTNLSKGKGVSHFSPTNDGNVSEDDEPSFTEDGNGDNSSGAKSKKGSPWQRMK 123

Query: 119 WTDKMVRLLITAVSYIGEDMSSDGDGGVRRKLAILQKKGKWKLISKVMAERGFHVSRQQC 178
           WTD +VRLLI  V+ +G+D + DG  G++RK  ILQKKGKWK +SK++  +G HVS QQ 
Sbjct: 124 WTDNVVRLLIAVVACVGDDGAFDGVEGLKRKSGILQKKGKWKTVSKILISKGCHVSPQQS 183

Query: 179 EDKFNDLNKRYKKLNDMLGRGTSCEVVENPALLVHIDYLTEKEKDDVRKILSSKHLFYEE 238
           EDKFNDLNKRYK+LND+LGRGTSC VVENPAL+  +  L+ K K+DVRKILSSKHLFY+E
Sbjct: 184 EDKFNDLNKRYKRLNDILGRGTSCRVVENPALMDSMP-LSAKAKEDVRKILSSKHLFYKE 242

Query: 239 MCSYHNSNRLHLPHDPALQ-HSLQLALRSKDDHDNDDIQRNQKYDLDEDDQEVETDDHDE 297
           MC+YHN   +    D  LQ  SL L   S+D++ +++ +  + +D  ++D+    DD++ 
Sbjct: 243 MCAYHNGQMIPNCQDLDLQGFSLPLERCSRDNNGSEE-EEAEGHDDSDEDESDNEDDNNA 301

Query: 298 FEEKHPSHGNDRGIYGVLGGSMKRLRHGRGCKDSCFWNPSQDGNKGSYPHLQIAQVDMNQ 357
            EE     G   G+Y          R+    +D+  W   Q G   S+      +V+M  
Sbjct: 302 IEE-----GERMGMYAE--------RNKVNEEDAHLW--PQSGGCNSF------EVEMAG 340

Query: 358 MSTESTKAAWLHKQWMESQTXXXXXXXXXXXXXXXXXXXXRFKWKRFSRKRDHELEKLRV 417
           +  + + + W  K+W+  Q                     RFKW R+  K+D E EKLR+
Sbjct: 341 IFQDPSVSLWEKKEWINKQKLQLLEQRVSIQAQAFELEKQRFKWLRYCSKKDKEFEKLRL 400

Query: 418 ENERMKLENERIALELKRKEM 438
           ENERM+LENE+  L+L++K++
Sbjct: 401 ENERMRLENEQSVLQLRQKQL 421


>29815.m000502 conserved hypothetical protein
          Length = 499

 Score =  217 bits (553), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 144/395 (36%), Positives = 217/395 (54%), Gaps = 43/395 (10%)

Query: 84  KMKNSASDEDEPSYTEDDGNGHSEGKKGL-PWQRVKWTDKMVRLLITAVSYIGEDMSSDG 142
           K ++  SDEDEP +T DD  G  +GK+ + PWQR+KWTD MVRLLI AV YIG++  S+G
Sbjct: 82  KPQSPLSDEDEPGFTGDDSTG--DGKRKVSPWQRMKWTDSMVRLLIMAVFYIGDEAGSEG 139

Query: 143 --DGGVRRKLA---ILQKKGKWKLISKVMAERGFHVSRQQCEDKFNDLNKRYKKLNDMLG 197
             D    +K A   + QKKGKWK +S+ M E+GF+VS QQCEDKFNDLNKRYK++ND+LG
Sbjct: 140 NNDPSTGKKKAGGGLSQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILG 199

Query: 198 RGTSCEVVENPALLVHIDYLTEKEKDDVRKILSSKHLFYEEMCSYHNSNRLHLPHDPA-- 255
           +GT+C+VVEN +LL  +D L+ K K++V+K+L+SKHLF+ EMC+YHNS   H  +  A  
Sbjct: 200 KGTACKVVENQSLLETMD-LSPKMKEEVKKLLNSKHLFFREMCAYHNSCG-HGSNGIASG 257

Query: 256 LQHSLQLAL-RSKDDHDNDDIQRNQKYDLDEDDQEVETDDHDEFE--------------- 299
             HS ++A  +S   H      + Q+     ++ +  T    E E               
Sbjct: 258 TNHSPEIATDQSHPQHQQASHLQQQRCSHSTENAQFATISRTEAEGSKMAKRIRNEEDDE 317

Query: 300 ------EKHPSHGNDRGIYGVLGGSMKRLRHGRGCKDSCFWNPSQDGNKGSYPHLQIAQV 353
                 ++      D     + G S  + RHG   ++     P+Q   +     L  +  
Sbjct: 318 EDYDESDEDEDEDEDDEDEAIEGTSRSQNRHGHEDEEDHEEKPAQKRQRTGVHSL--SSS 375

Query: 354 DMNQMSTE-------STKAAWLHKQWMESQTXXXXXXXXXXXXXXXXXXXXRFKWKRFSR 406
            M Q+++E         K+ W  K WM+ ++                    R KW +FS 
Sbjct: 376 LMQQLNSELMGVIQDGAKSPWEKKHWMKLRSMQLEEQQLSYQCQAFELEKQRLKWVKFSS 435

Query: 407 KRDHELEKLRVENERMKLENERIALELKRKEMGIV 441
           K++ E+EK +++N+R  LE+ER+ L +++KE+ ++
Sbjct: 436 KKEREMEKAKLDNDRRMLESERMVLLIRQKELELL 470