Jatropha Genome Database

JcCB0536281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0536281.10 + phase: 2 /partial
         (156 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29848.m004627 conserved hypothetical protein                          184   2e-47
29333.m001080 conserved hypothetical protein                          116   4e-27
29816.m000675 conserved hypothetical protein                          102   1e-22
29844.m003161 conserved hypothetical protein                           86   5e-18
29598.m000442 conserved hypothetical protein                           71   2e-13
29736.m002102 conserved hypothetical protein                           61   2e-10
29633.m000897 conserved hypothetical protein                           59   1e-09

>29848.m004627 conserved hypothetical protein
          Length = 426

 Score =  184 bits (466), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/137 (70%), Positives = 101/137 (73%), Gaps = 22/137 (16%)

Query: 12  KQTFKSISFNERQVQASKQSGKSDVASSEGL----------------------ISPTAED 49
           KQ  KS SF+ER VQ +K   K DV SSEGL                      +SPTAED
Sbjct: 141 KQPLKSKSFSERLVQTAKHPAKCDVTSSEGLMETLKLKTSKGPAKAEEIAQASLSPTAED 200

Query: 50  SKPRRVGALPNYGFSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKM 109
           +KPRRV ALPNYGFSFKCDERAEKRREFYSKLEEKIHAKE+E N LQAKSKETQEAEIKM
Sbjct: 201 AKPRRVAALPNYGFSFKCDERAEKRREFYSKLEEKIHAKELEMNNLQAKSKETQEAEIKM 260

Query: 110 LRKSLNFKATPMPSFYQ 126
           LRKSL FKATPMPSFYQ
Sbjct: 261 LRKSLAFKATPMPSFYQ 277


>29333.m001080 conserved hypothetical protein
          Length = 484

 Score =  116 bits (291), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/65 (83%), Positives = 60/65 (92%)

Query: 62  GFSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKATPM 121
           GFSF+ DERAE+RREF+SKLEEKIHAKE+EKN LQAKS+E QEAEIK LRKSL FKATPM
Sbjct: 254 GFSFRLDERAERRREFFSKLEEKIHAKEMEKNNLQAKSQENQEAEIKQLRKSLTFKATPM 313

Query: 122 PSFYQ 126
           PSFY+
Sbjct: 314 PSFYK 318


>29816.m000675 conserved hypothetical protein
          Length = 639

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 54/64 (84%)

Query: 63  FSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKATPMP 122
           FSFK DERAE+R+EFY KLEEK+HAKE E N +QAK++E  EAEIK LRKSLNFKA PMP
Sbjct: 407 FSFKSDERAERRKEFYMKLEEKLHAKEAEMNQIQAKTQEKTEAEIKQLRKSLNFKAMPMP 466

Query: 123 SFYQ 126
           SFY 
Sbjct: 467 SFYH 470


>29844.m003161 conserved hypothetical protein
          Length = 391

 Score = 86.3 bits (212), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 62/103 (60%), Gaps = 3/103 (2%)

Query: 24  QVQASKQSGKSDVASSEGLISPTAEDSKPRRVGALPNYGFSFKCDERAEKRREFYSKLEE 83
           Q    K   + D  S   + + +A  +K R   A       F+C ERAEKR+EFYSKLEE
Sbjct: 191 QPNNKKHPDEEDTCSVTSITAASARTTKSRSAAA---SAPVFRCSERAEKRKEFYSKLEE 247

Query: 84  KIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKATPMPSFYQ 126
           K  A E EK   +A++KE +EA+IK LRKSL FKA PMPSFY 
Sbjct: 248 KHQALEAEKTESEARTKEEKEADIKQLRKSLLFKANPMPSFYH 290


>29598.m000442 conserved hypothetical protein
          Length = 363

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 55  VGALPNYGFSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSL 114
           +G+ P    SFK  ERAE+R+EFY KLEEK  A E +++  +A+SKE Q+A IK LRK++
Sbjct: 183 IGSAP----SFKSAERAERRKEFYLKLEEKHRALEEQRSQAEARSKEEQQAAIKQLRKNM 238

Query: 115 NFKATPMPSFY 125
             KA P+PSFY
Sbjct: 239 VVKAKPVPSFY 249


>29736.m002102 conserved hypothetical protein
          Length = 556

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%)

Query: 63  FSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKATPMP 122
           F  K DER E+R+E   KL EK +A E E   L+ KSKE + AEI+ LR+SLNFK   +P
Sbjct: 432 FGLKSDERTERRKELSKKLVEKSNANEAESTGLRTKSKEEKGAEIRKLRQSLNFKGRHVP 491

Query: 123 SFYQ 126
              Q
Sbjct: 492 GGLQ 495


>29633.m000897 conserved hypothetical protein
          Length = 543

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 3/64 (4%)

Query: 63  FSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKATPMP 122
           F+ + +ERA +R+E   +LEEK +A + EK  LQA  KE  E EIK LR++L FKA P+P
Sbjct: 406 FNLRTEERAARRKE---RLEEKFNANQKEKVQLQATLKEKAETEIKKLRQTLCFKARPLP 462

Query: 123 SFYQ 126
            FY+
Sbjct: 463 KFYK 466