Jatropha Genome Database

JcCB0535351.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0535351.10 - phase: 1 /pseudo/partial
         (209 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006452 DNA-damage-inducible protein f, putative                282   6e-77
29606.m000098 DNA-damage-inducible protein f, putative                234   2e-62
29606.m000099 DNA-damage-inducible protein f, putative                217   2e-57
27810.m000635 DNA-damage-inducible protein f, putative                207   4e-54
29820.m001007 DNA-damage-inducible protein f, putative                143   6e-35
29830.m001422 DNA-damage-inducible protein f, putative                140   3e-34
30122.m000355 DNA-damage-inducible protein f, putative                130   3e-31

>30169.m006452 DNA-damage-inducible protein f, putative
          Length = 522

 Score =  282 bits (722), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 148/193 (76%), Positives = 155/193 (80%)

Query: 17  PSGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAIL 76
           PSGFLLLMRVIAVTFCVTLSASLAARQGS +MAAFQVCLQVWLATSLLADGLAVAGQAIL
Sbjct: 316 PSGFLLLMRVIAVTFCVTLSASLAARQGSISMAAFQVCLQVWLATSLLADGLAVAGQAIL 375

Query: 77  ATAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIP 136
           A+AFAK +Y+KA ATASRV                   S+G+RLFTSDVNVL MISIGIP
Sbjct: 376 ASAFAKGEYDKAIATASRVLQLGLLLGLMLAVVLGLGLSYGARLFTSDVNVLHMISIGIP 435

Query: 137 FVAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALT 196
           FVAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVA             YKFIG+WVALT
Sbjct: 436 FVAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAVGSIFCLLFLSSAYKFIGVWVALT 495

Query: 197 IYMSLRTSAGFWR 209
           IYM LR SAGFWR
Sbjct: 496 IYMGLRASAGFWR 508


>29606.m000098 DNA-damage-inducible protein f, putative
          Length = 546

 Score =  234 bits (598), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/192 (63%), Positives = 138/192 (71%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           +GFLLL RVIA T CVTL+AS AAR GST MAAFQ+CLQVWL +SLLADGLAVAGQAI+A
Sbjct: 338 NGFLLLARVIAATICVTLAASRAARLGSTRMAAFQICLQVWLTSSLLADGLAVAGQAIIA 397

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
            AFA+ DY+KAT  A+RV                    FG  +F+ D NVL +ISIGIPF
Sbjct: 398 CAFAEKDYQKATTAATRVLQMSFVLGLGLAAVVGIGLHFGDGIFSKDPNVLDIISIGIPF 457

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           VA TQPIN++AFVFDGVNFGASDFAYSAYSMVLVA            T  F+GIW+ALTI
Sbjct: 458 VAATQPINSIAFVFDGVNFGASDFAYSAYSMVLVAVASIAAIFVLSKTGGFVGIWIALTI 517

Query: 198 YMSLRTSAGFWR 209
           +M LRT AG WR
Sbjct: 518 FMGLRTFAGVWR 529


>29606.m000099 DNA-damage-inducible protein f, putative
          Length = 518

 Score =  217 bits (553), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 113/192 (58%), Positives = 132/192 (68%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           +GFLLL R+IA T    L+AS  AR GST MAAFQ+CLQVWL +SLLADGL VAGQAI+A
Sbjct: 310 NGFLLLARIIAATIFKVLAASRGARLGSTPMAAFQICLQVWLTSSLLADGLTVAGQAIIA 369

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
            AFA+ DY+KATA A+R+                    FG  +F+ D NVL +ISIGIPF
Sbjct: 370 CAFAEKDYQKATAAATRILQMSFVLGLGLAAVVGVGLHFGDGIFSKDPNVLDIISIGIPF 429

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           VA TQ IN++A VFDGVNFGASDFAYSAYSMVLVA            T  F+GIW+A+TI
Sbjct: 430 VAATQHINSIALVFDGVNFGASDFAYSAYSMVLVAIASIVAIFVLSKTAGFVGIWIAITI 489

Query: 198 YMSLRTSAGFWR 209
           +M LRT AG WR
Sbjct: 490 FMGLRTLAGVWR 501


>27810.m000635 DNA-damage-inducible protein f, putative
          Length = 906

 Score =  207 bits (526), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 104/154 (67%), Positives = 122/154 (79%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           +GFLLLMRVIA TFCVTL+ASLAAR GST+MAAFQVCLQ+ ++TSLLADGLAVAGQAILA
Sbjct: 706 NGFLLLMRVIASTFCVTLAASLAARHGSTSMAAFQVCLQIGMSTSLLADGLAVAGQAILA 765

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
           +AFA +DY+KA ATASRV                    F SRLFT D++VL +I++G+PF
Sbjct: 766 SAFANNDYDKAKATASRVLQLGLVLGLLLSVILLVGLQFASRLFTEDISVLHLITVGMPF 825

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLV 171
           V  TQPIN LAFVFDG+N+GASDFAYSAYSM L+
Sbjct: 826 VTATQPINVLAFVFDGINYGASDFAYSAYSMALL 859


>29820.m001007 DNA-damage-inducible protein f, putative
          Length = 560

 Score =  143 bits (360), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/192 (44%), Positives = 113/192 (58%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           SG LL+ R IAV   +TL+ S+AAR+G   MA  Q+C+QVWLA SLL D LA+AGQA+LA
Sbjct: 345 SGGLLIGRTIAVLLTMTLATSMAAREGPIPMAGHQICMQVWLAVSLLNDALALAGQALLA 404

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
           + F++ +YE+A     RV                      S LF++D  VL +   GI F
Sbjct: 405 SGFSQGNYEEARQVIYRVLQIGVVTGIALGVILSLGFGAFSSLFSTDSEVLEIAWSGILF 464

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           VAG+QP+NA+AFV DG+ +G SDF Y+AYSMVLV              Y   G+W  L +
Sbjct: 465 VAGSQPMNAIAFVLDGLYYGVSDFGYAAYSMVLVGLISSAFILAAAPVYGLPGVWTGLFL 524

Query: 198 YMSLRTSAGFWR 209
           +M+LR  AG WR
Sbjct: 525 FMTLRVVAGIWR 536


>29830.m001422 DNA-damage-inducible protein f, putative
          Length = 447

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 108/192 (56%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           SG  LL R +A    +TLS S+AARQG+ AMAA Q+CLQVWL+ SLL D  A + QA++A
Sbjct: 240 SGGFLLGRTLAAVMTITLSTSMAARQGALAMAAHQICLQVWLSVSLLVDAQAASSQALIA 299

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
           ++ AK DY +                           S  + LFT D  VL ++  G+ F
Sbjct: 300 SSSAKGDYSRVKEITFCSLKLGLFTGISLAIILGVSFSSLATLFTKDAEVLAIVRTGVLF 359

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           V  +QPINA+A++FDG+++G SDF+Y+A+SM+ V                  G+W  LT+
Sbjct: 360 VTASQPINAIAYIFDGLHYGISDFSYAAWSMMAVGALSSVFMLYLPSVVGLSGVWSGLTL 419

Query: 198 YMSLRTSAGFWR 209
           +M LRT AG+ R
Sbjct: 420 FMGLRTVAGYMR 431


>30122.m000355 DNA-damage-inducible protein f, putative
          Length = 605

 Score =  130 bits (328), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 112/194 (57%), Gaps = 4/194 (2%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           SG  L+ R +AV    TL+ S+AARQG  AMAA Q+C+QVWLA SLL D  A + QA++A
Sbjct: 376 SGGFLIGRTLAVLTTTTLATSMAARQGPVAMAAHQICMQVWLAVSLLTDAFAASAQALIA 435

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGS--RLFTSDVNVLRMISIGI 135
           +  +K DY+     ++ V                   SFGS   LFT D  VL ++  GI
Sbjct: 436 SYSSKGDYKNVREVSNFV--LKIGLLTGVSLAAILGVSFGSIATLFTKDAEVLGIVRTGI 493

Query: 136 PFVAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVAL 195
            FV+ +QP+NALAF+FDG+++G SDFAY+A SM+LV                  G+W  L
Sbjct: 494 LFVSASQPLNALAFIFDGLHYGVSDFAYAARSMMLVGVISSVFLIYAPSVIGLPGVWSGL 553

Query: 196 TIYMSLRTSAGFWR 209
            ++M LRT+AG+ R
Sbjct: 554 ALFMGLRTAAGYIR 567