Jatropha Genome Database

JcCB0534201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0534201.10 - phase: 2 /partial
         (100 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29982.m000222 group II plp decarboxylase, putative                    194   8e-51

>29982.m000222 group II plp decarboxylase, putative
          Length = 471

 Score =  194 bits (493), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 89/99 (89%), Positives = 96/99 (96%)

Query: 1   AHYLKDRLRDAGISAMLNELSSTVVFERPRDEEFVRRWQLACQGSIAHVVVMPNVTIEKL 60
           AHYLK RLRDAGISAMLNELSSTVV ERP+DEEFVRRWQLACQG+IAHVVVMP+VTIEKL
Sbjct: 372 AHYLKGRLRDAGISAMLNELSSTVVLERPKDEEFVRRWQLACQGNIAHVVVMPSVTIEKL 431

Query: 61  DNFLNELIEKRSTWYQDGQLQSPCIATDVGSENCACALH 99
           DNFL+EL++KRSTWYQDGQ+QSPCIA DVGSENCACALH
Sbjct: 432 DNFLDELVKKRSTWYQDGQVQSPCIAADVGSENCACALH 470