Jatropha Genome Database

JcCB0523501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0523501.10 - phase: 0 /partial
         (249 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30055.m001532 oxidoreductase, acting on the CH-CH group of donor...   290   5e-79
29791.m000527 Male sterility protein, putative                        250   3e-67
30055.m001531 Male sterility protein, putative                        247   4e-66
28902.m000037 Male sterility protein, putative                        144   3e-35
33081.m000012 conserved hypothetical protein                          102   2e-22
28516.m000032 Male sterility protein, putative                         58   4e-09
30029.m000017 conserved hypothetical protein                           55   4e-08

>30055.m001532 oxidoreductase, acting on the CH-CH group of donors,
           putative
          Length = 414

 Score =  290 bits (741), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 147/249 (59%), Positives = 187/249 (75%)

Query: 1   MGEMIVGHLKENLPMVIVRPTMVTSTWREPFPGWIEGVRTIDALIVGYGSGKMSFFVADL 60
           MGEMIVGHLKENL +VI+RPT++TST++EPFPGW+EGVRTID+L VGYG G+++ F+ D+
Sbjct: 166 MGEMIVGHLKENLSVVILRPTIITSTYKEPFPGWVEGVRTIDSLAVGYGKGRLTCFLGDI 225

Query: 61  TXXXXXXXXXXXXNTIIAAMIVHANNQPCQVVYHIGSSIGNPIRYSNFRDYLYFYFTSKP 120
                        N II AM  HAN      +Y +GSS+ +P+RY+N +DY   YFT KP
Sbjct: 226 NGIVDVIPADMVVNAIIVAMTAHANRPSENAIYQVGSSVRHPLRYANLQDYGLNYFTKKP 285

Query: 121 WILQNGKPVKVAKPTILTTMANFHRYIAIRYLPLLKVLKLANTISCDYFQGTYNNLNRKI 180
           WI ++GKPVKV K  +L +MA+F RY+A+RYL LLK L+LANT  C YFQG Y++LNRKI
Sbjct: 286 WIGKDGKPVKVGKVKVLDSMASFRRYMAVRYLLLLKGLELANTAFCHYFQGIYSDLNRKI 345

Query: 181 KRVTRLVELYQPYLFFHGIFDDSNTNKLLGIAKDNGTETNNFFFDVKSIDWDDYFINTHI 240
             V +LVELY+PYLFF G+FDD NT KL   A++NGTE + F+FD KSIDW+DYF+N HI
Sbjct: 346 NFVMKLVELYRPYLFFQGVFDDINTEKLRMAARENGTEIDMFYFDPKSIDWEDYFVNVHI 405

Query: 241 PSIVKYVLK 249
           P +VKYV K
Sbjct: 406 PGVVKYVFK 414


>29791.m000527 Male sterility protein, putative
          Length = 493

 Score =  250 bits (639), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 116/251 (46%), Positives = 165/251 (65%), Gaps = 3/251 (1%)

Query: 1   MGEMIVGHLKENLPMVIVRPTMVTSTWREPFPGWIEGVRTIDALIVGYGSGKMSFFVADL 60
           M EM++ H+KENLP++I+RPTM+TST+++PFPGWIEGVRTID++IVGYG  K++ FV+  
Sbjct: 243 MAEMLLVHMKENLPLLIIRPTMITSTYKQPFPGWIEGVRTIDSVIVGYGKRKITCFVSSP 302

Query: 61  TXXXXXXXXXXXXNTIIAAMIVHANNQPCQVVYHIGSSIGNPIRYSNFRDYLYFYFTSKP 120
                        N II AM      Q  +++Y IGSS+ NP+++SN  D+ Y YF++ P
Sbjct: 303 RSILDVIPADMVVNGIIVAMATRYQKQSSEIIYQIGSSLRNPLKFSNIHDFAYRYFSANP 362

Query: 121 WILQNGKPVKVAKPTILTTMANFHRYIAIRYLPLLKVLKLANTISCDYFQGTYNNLNRKI 180
           WI + G PVK+ K  +L++M +FH Y+A+ +   LK  +LA T+    +Q  Y  L+RK+
Sbjct: 363 WIDKEGSPVKIGKGIVLSSMTSFHMYMAVCFQLPLKAFELATTLVLKEYQDKYRLLDRKV 422

Query: 181 KRVTRLVELYQPYLFFHGIFDDSNTNKLLGIAKDNG---TETNNFFFDVKSIDWDDYFIN 237
           K V RLV+LY+ YLFF GIFDD+N  KL   A+       E + F FD  +IDW+DY + 
Sbjct: 423 KLVQRLVDLYKSYLFFEGIFDDTNLEKLRTEARLRSLEVEEMDEFNFDPTNIDWEDYMMG 482

Query: 238 THIPSIVKYVL 248
            HIP +VKY +
Sbjct: 483 VHIPGLVKYTM 493


>30055.m001531 Male sterility protein, putative
          Length = 493

 Score =  247 bits (631), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 116/251 (46%), Positives = 165/251 (65%), Gaps = 3/251 (1%)

Query: 1   MGEMIVGHLKENLPMVIVRPTMVTSTWREPFPGWIEGVRTIDALIVGYGSGKMSFFVADL 60
           MGEMI+ H+KE+L ++I+RPTM+TST+REPFPGWIEG RT+D++IVGYG GK+  FV+  
Sbjct: 243 MGEMILMHMKEDLSLLIIRPTMITSTYREPFPGWIEGARTVDSVIVGYGKGKVGCFVSRP 302

Query: 61  TXXXXXXXXXXXXNTIIAAMIVHANNQPCQVVYHIGSSIGNPIRYSNFRDYLYFYFTSKP 120
                        N II AM   A  Q  +++Y IGSS+ NP++ S+  D+ Y YF++ P
Sbjct: 303 ESVLDVIPADMVVNGIIVAMATRAQKQASEIIYQIGSSLRNPLKLSSVNDFSYRYFSANP 362

Query: 121 WILQNGKPVKVAKPTILTTMANFHRYIAIRYLPLLKVLKLANTISCDYFQGTYNNLNRKI 180
           WI + G PVK +K  IL++M  F+ Y+A R+   LK L++A  +    +Q     L+RK+
Sbjct: 363 WINKEGVPVKTSKAIILSSMTKFYIYMAFRFQLPLKALQVATILVLKNYQDMCTVLDRKV 422

Query: 181 KRVTRLVELYQPYLFFHGIFDDSNTNKLLGIAKDNG---TETNNFFFDVKSIDWDDYFIN 237
           K V RLV+LY+PY+FF G FDDSN+ KL   A++      E + F FD   IDW++Y ++
Sbjct: 423 KLVMRLVQLYKPYVFFEGSFDDSNSEKLRIEARERSLELKEMDEFNFDPTEIDWENYMMS 482

Query: 238 THIPSIVKYVL 248
            HIP +VKYV+
Sbjct: 483 VHIPGLVKYVM 493


>28902.m000037 Male sterility protein, putative
          Length = 442

 Score =  144 bits (364), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 135/254 (53%), Gaps = 14/254 (5%)

Query: 1   MGEMIVGHLKENLPMVIVRPTMVTSTWREPFPGWIEGVRTIDALIVGYGSGKMSFFVADL 60
           MGEMI+  ++  +P+VI+RP+++ ST+R+PFPGWI+G R +D L+V YG G+++ F+AD 
Sbjct: 194 MGEMIIDSMRGEIPVVIIRPSIIESTYRDPFPGWIQGNRMLDPLMVYYGKGQLTCFLADP 253

Query: 61  TXXXXXXXXXXXXNTIIAAMIVHA-NNQPCQVVYHIGSSIGNPIRYSNFRDYLYFYFTSK 119
                        N  +AA+  H    +P   +Y +GSS+ NP+        ++ +F   
Sbjct: 254 NCVVDIVPADTVVNATLAAVAKHGMTREPVINIYQVGSSVVNPLTLQELVTLVFEHFKCN 313

Query: 120 PWILQNGKPVKVAKP-TILTTMANFHRYIAIRYLPLLKVLKLANTISCDYFQGTYNNL-- 176
           P++   G P+ V  P  + T++  F  ++         V K    ++ ++       +  
Sbjct: 314 PFLDSKGNPINVTAPMKLCTSVEEFSTHLKT------DVAKQREFMAMEFKNSKRPEIYA 367

Query: 177 NRKIKRVTRLVELYQPYLFFHGIFDDSNTNKLLGIAKDNGTETN-NFFFDVKSIDWDDYF 235
            + ++ V +L  +Y+PY F+ G FD SN   L G+ ++   E    F FDVKSIDW  Y 
Sbjct: 368 QKLMELVRQLATIYKPYGFYKGRFDCSN---LQGLMENMSEEEKIEFGFDVKSIDWGHYI 424

Query: 236 INTHIPSIVKYVLK 249
            N H+P +  +V++
Sbjct: 425 KNVHVPGLRMHVMQ 438


>33081.m000012 conserved hypothetical protein
          Length = 177

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 8/176 (4%)

Query: 77  IAAMIVHAN-NQPCQVVYHIGSSIGNPIRYSNFRDYLYFYFTSKPWILQNGKPVKVAKPT 135
           +AAM +H    +P   VY I SS+ NP+ + +    LY ++ S P++   GKP+ V    
Sbjct: 1   MAAMAMHGMVPKPGINVYQIASSVVNPLVFKDLAKLLYEHYNSTPYMDSKGKPIHVPSMK 60

Query: 136 ILTTMANFHRYIAIRYLPLLKVLKLANTISCD-YFQGTYNNLNRK-IKRVTRLVELYQPY 193
           +  +M +F  ++   +  +++   L    S D      Y  + RK +++   L  +Y+PY
Sbjct: 61  LFNSMEDFSEHL---WRDVIQRNGLTAMASSDGKLSKKYELICRKSVEQAKYLANIYEPY 117

Query: 194 LFFHGIFDDSNTNKLLGIAKDNGTETNNFFFDVKSIDWDDYFINTHIPSIVKYVLK 249
            F+ G FD+SNT +L+    +  TE  NF FDV++IDW +Y IN HIP + K+V+K
Sbjct: 118 TFYGGRFDNSNTQRLMESMSE--TEKKNFGFDVENIDWREYIINVHIPGLRKHVMK 171


>28516.m000032 Male sterility protein, putative
          Length = 387

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 31/37 (83%)

Query: 1   MGEMIVGHLKENLPMVIVRPTMVTSTWREPFPGWIEG 37
           MGEM++  ++  +P+VI+RP+++ ST REPFPGW+EG
Sbjct: 350 MGEMMIDSMRGEIPVVIIRPSVIESTCREPFPGWMEG 386


>30029.m000017 conserved hypothetical protein
          Length = 285

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 32/39 (82%)

Query: 1   MGEMIVGHLKENLPMVIVRPTMVTSTWREPFPGWIEGVR 39
           MGEM++  ++  +P+VI+RP+++ ST++EPF GWI+G R
Sbjct: 247 MGEMVIDSMRGEVPVVIIRPSIIESTYKEPFSGWIQGNR 285