Jatropha Genome Database

JcCB0514151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0514151.10 + phase: 1 /partial
         (55 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29942.m000747 adenosine diphosphatase, putative                        67   2e-12

>29942.m000747 adenosine diphosphatase, putative
          Length = 480

 Score = 66.6 bits (161), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 39/49 (79%)

Query: 3   REGSLGNPCLPKGYESAFNVSYSELLFSHPAGNFTECRLEALTLLKSKE 51
           R  S GNPC+PKG+E A N + ++LL SH AGNFT CRLEAL+LLKS++
Sbjct: 303 RVVSDGNPCIPKGFEIASNTNEAQLLLSHSAGNFTACRLEALSLLKSQQ 351