Jatropha Genome Database

JcCB0498951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0498951.10 + phase: 0 /pseudo/partial
         (236 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29864.m001501 9-cis-epoxycarotenoid dioxygenase, putative             155   1e-38
29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative              67   6e-12
30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative              58   5e-09
29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative              57   7e-09
29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative              56   1e-08

>29864.m001501 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 536

 Score =  155 bits (392), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 71/86 (82%), Positives = 77/86 (89%)

Query: 4  PAIVEVNPKPNKGLTSKLVDYLEKLIVKLMFDKSQPLHYLNGNFAPVPEAPPVKDLPVIG 63
          P IVEVNP P KGLTSK++D+LEKLIVKLM D SQPLHYL+GNFAPV E PPV DLPV G
Sbjct: 13 PPIVEVNPSPRKGLTSKVIDFLEKLIVKLMHDPSQPLHYLSGNFAPVDETPPVTDLPVKG 72

Query: 64 HLPECLNGEFVRVGPNPKFAPVAGYH 89
          HLPEC+NGEFVRVGPNPKF+PVAGYH
Sbjct: 73 HLPECMNGEFVRVGPNPKFSPVAGYH 98


>29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 607

 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 41/58 (70%)

Query: 37  SQPLHYLNGNFAPVPEAPPVKDLPVIGHLPECLNGEFVRVGPNPKFAPVAGYH*WKGN 94
           + P   ++GN+APVPE P  + LPV G +P+C+NG +VR G NP F P+AG+H + G+
Sbjct: 125 ADPRVQISGNYAPVPEQPVRQSLPVTGTIPDCINGVYVRNGANPLFEPIAGHHLFDGD 182


>30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 603

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%)

Query: 37  SQPLHYLNGNFAPVPEAPPVKDLPVIGHLPECLNGEFVRVGPNPKFAPVAGYH*WKGN 94
           + P+  + GNFAPVPE   V  LPV G +P+ ++G ++R G NP   PVAG+H + G+
Sbjct: 121 ADPVVQICGNFAPVPEQSVVHSLPVAGKIPDSIHGVYIRNGANPLHEPVAGHHFFDGD 178


>29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 618

 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 42/78 (53%)

Query: 17  LTSKLVDYLEKLIVKLMFDKSQPLHYLNGNFAPVPEAPPVKDLPVIGHLPECLNGEFVRV 76
           + S   D + K I   M     P + L+ NFAPV E PP +   V G L  CL+G ++R 
Sbjct: 113 MFSAFDDIINKFIDPPMRPSVDPRYILSDNFAPVDELPPTECEVVEGSLLSCLDGAYIRN 172

Query: 77  GPNPKFAPVAGYH*WKGN 94
           GPNP++ P   YH + G+
Sbjct: 173 GPNPQYLPRGPYHLFDGD 190


>29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 618

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 35/57 (61%)

Query: 38  QPLHYLNGNFAPVPEAPPVKDLPVIGHLPECLNGEFVRVGPNPKFAPVAGYH*WKGN 94
            P   ++GNFAPV E P    L V+GH+P  L G ++R G NP +AP  G+H + G+
Sbjct: 116 DPTVQISGNFAPVLECPVHHGLEVVGHIPNSLRGVYLRNGANPVYAPTGGHHLFDGD 172