Jatropha Genome Database

JcCB0496181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0496181.10 - phase: 0 /pseudo
         (255 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27383.m000156 triosephosphate isomerase, putative                     316   6e-87
29711.m000323 triosephosphate isomerase, putative                     196   7e-51
30028.m000254 triosephosphate isomerase, putative                     177   6e-45

>27383.m000156 triosephosphate isomerase, putative
          Length = 254

 Score =  316 bits (810), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 160/218 (73%), Positives = 170/218 (77%), Gaps = 43/218 (19%)

Query: 1   MARKFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLC 60
           MARKFFVGGNWKCNGT+E+VKKIVSTLNEG VPSSDVV                      
Sbjct: 1   MARKFFVGGNWKCNGTSEEVKKIVSTLNEGHVPSSDVV---------------------- 38

Query: 61  IVFDIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTG 120
                                EVVISPPFVFLPLVK SL+PDFHVAAQNCWVKKGGAFTG
Sbjct: 39  ---------------------EVVISPPFVFLPLVKDSLKPDFHVAAQNCWVKKGGAFTG 77

Query: 121 EVSAEMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREA 180
           EVSAEMLVNL+I WVILGHSERRLLL+ESNEFVGDKVAYALSQGLKVIACVGETLEQREA
Sbjct: 78  EVSAEMLVNLSIPWVILGHSERRLLLSESNEFVGDKVAYALSQGLKVIACVGETLEQREA 137

Query: 181 GSTLEVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
           GST++VVAAQTKAIA R+K+W DVVLAYEPVWAIGTG+
Sbjct: 138 GSTMDVVAAQTKAIAERVKDWADVVLAYEPVWAIGTGK 175


>29711.m000323 triosephosphate isomerase, putative
          Length = 313

 Score =  196 bits (499), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 100/214 (46%), Positives = 127/214 (59%), Gaps = 45/214 (21%)

Query: 5   FFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLCIVFD 64
           FFVGGNWKCNGT E + K+VS LN                                    
Sbjct: 64  FFVGGNWKCNGTKESISKLVSDLN------------------------------------ 87

Query: 65  IAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTGEVSA 124
                    D  L+   +VV++PPF+++  VKSSL     ++AQN WV KGGAFTGE+S 
Sbjct: 88  ---------DAKLEADVDVVVAPPFIYIDQVKSSLTDRIEISAQNSWVSKGGAFTGEISV 138

Query: 125 EMLVNLAILWVILGHSERRLLLTESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTL 184
           E L ++   WVILGHSERR ++ E++EF+G K AYALSQGL VIAC+GE LE+REAG T 
Sbjct: 139 EQLNDIGCKWVILGHSERRHVIGENDEFIGKKAAYALSQGLGVIACIGELLEEREAGKTF 198

Query: 185 EVVAAQTKAIAARIKNWTDVVLAYEPVWAIGTGE 218
           +V   Q KA A  + +W  +V+AYEPVWAIGTG+
Sbjct: 199 DVCFQQLKAYADAVPSWDKIVIAYEPVWAIGTGK 232


>30028.m000254 triosephosphate isomerase, putative
          Length = 118

 Score =  177 bits (448), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 92/153 (60%), Positives = 101/153 (66%), Gaps = 43/153 (28%)

Query: 1   MARKFFVGGNWKCNGTTEDVKKIVSTLNEGQVPSSDVVGRWNALISVSALCFASVNVLLC 60
           M RKFFVGGNWKCNGTTE+VKKIV+TLNE +VPS                          
Sbjct: 1   MGRKFFVGGNWKCNGTTEEVKKIVTTLNEAEVPS-------------------------- 34

Query: 61  IVFDIAVTVVNTRDLNLDDLKEVVISPPFVFLPLVKSSLRPDFHVAAQNCWVKKGGAFTG 120
                            DD+ EVV+SPPFVFLPLVKS LRPDF VAAQNCWV+KGGAFTG
Sbjct: 35  -----------------DDVVEVVLSPPFVFLPLVKSLLRPDFQVAAQNCWVRKGGAFTG 77

Query: 121 EVSAEMLVNLAILWVILGHSERRLLLTESNEFV 153
           EVSAEML+NL+I WVILGHSERR LL ESNE +
Sbjct: 78  EVSAEMLLNLSIPWVILGHSERRALLNESNELL 110