Jatropha Genome Database

JcCB0495231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0495231.10 + phase: 0 /partial
         (220 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006419 copper-transporting atpase p-type, putative             354   1e-98
30190.m011197 copper-transporting atpase p-type, putative             140   4e-34
29840.m000632 copper-transporting atpase p-type, putative             106   1e-23
30190.m011198 copper-transporting atpase p-type, putative              50   6e-07

>30169.m006419 copper-transporting atpase p-type, putative
          Length = 968

 Score =  354 bits (909), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 170/209 (81%), Positives = 190/209 (90%), Gaps = 1/209 (0%)

Query: 13  NGKDDLKAPLLQPPDDVAIAVPKQKDNRDK-KVKTIRFKIGDIKCASCAASIESVLGELS 71
           NGKD LKAPLLQPPD+VAI+VPK KD RD  KVKTI+ KIG+IKC SCA S+ESVL EL+
Sbjct: 5   NGKDGLKAPLLQPPDNVAISVPKHKDGRDNNKVKTIKLKIGEIKCTSCATSVESVLQELN 64

Query: 72  GVEKAMVSPLDGHAAISYIPEFVTAQKIKETIEDAGFPVDEFPEQEISVCRLRIKGMACT 131
           GV++ +VSPLDGHAAISY+P+ VTAQ IKE+IE AGFPVDEFPEQEISVCRLRIKGMACT
Sbjct: 65  GVDRVVVSPLDGHAAISYVPDLVTAQNIKESIEAAGFPVDEFPEQEISVCRLRIKGMACT 124

Query: 132 SCSESVERALLMANGVKKAVVGLALEEAKIHFDPNLTDTDHIVEAVEDAGFGAEIISSGN 191
           SCSESVERALLMANGVKKAVVGLALEEAK+HFDPNLTDTDHI+EAVEDAGFGAE+ISSG+
Sbjct: 125 SCSESVERALLMANGVKKAVVGLALEEAKVHFDPNLTDTDHIIEAVEDAGFGAELISSGH 184

Query: 192 DLNKAHLKLEGIKSTEDAAVIRFSLESYR 220
           D+NK HLKLEGI S EDA +++ SLES R
Sbjct: 185 DVNKVHLKLEGINSVEDATIVQSSLESAR 213



 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 1/147 (0%)

Query: 41  DKKVKTIRFKIGDIKCASCAASIESVLGELSGVEKAMVSPLDGHAAISYIPEFVTAQKIK 100
           ++++   R +I  + C SC+ S+E  L   +GV+KA+V      A + + P       I 
Sbjct: 108 EQEISVCRLRIKGMACTSCSESVERALLMANGVKKAVVGLALEEAKVHFDPNLTDTDHII 167

Query: 101 ETIEDAGFPVDEFPE-QEISVCRLRIKGMACTSCSESVERALLMANGVKKAVVGLALEEA 159
           E +EDAGF  +      +++   L+++G+     +  V+ +L  A GV    + LA  + 
Sbjct: 168 EAVEDAGFGAELISSGHDVNKVHLKLEGINSVEDATIVQSSLESARGVNHVEMDLAEHKI 227

Query: 160 KIHFDPNLTDTDHIVEAVEDAGFGAEI 186
            + +DP L     I++ +E+A  G  +
Sbjct: 228 TVSYDPELIGPRSIIKCIEEASAGPNV 254


>30190.m011197 copper-transporting atpase p-type, putative
          Length = 987

 Score =  140 bits (354), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 108/169 (63%), Gaps = 4/169 (2%)

Query: 54  IKCASCAASIESVLGELSGVEKAMVSPLDGHAAISYIPEFVTAQKIKETIEDAGFPV--- 110
           + CA+CA S+E  +  L G+++A V  L+  A + + P FV  + I+ETIEDAGF     
Sbjct: 57  MTCAACAGSVEKAVKRLPGIKEAAVDVLNNRAQVLFYPTFVNEETIRETIEDAGFEATLI 116

Query: 111 -DEFPEQEISVCRLRIKGMACTSCSESVERALLMANGVKKAVVGLALEEAKIHFDPNLTD 169
            DE  ++   VCR++I GM CTSCS +VE+AL    GV+ A V LA EEA+IH+DP +  
Sbjct: 117 QDETNDKSAQVCRIQINGMTCTSCSSAVEQALQSIQGVQTAQVALATEEAEIHYDPKMLS 176

Query: 170 TDHIVEAVEDAGFGAEIISSGNDLNKAHLKLEGIKSTEDAAVIRFSLES 218
            + ++EA+++ GF A +IS+G  ++K  LK++GI +     +I  SL++
Sbjct: 177 YNQLLEAIDNTGFEAILISTGEYIDKIQLKVDGIWTYNSMRMIENSLQA 225



 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 4/170 (2%)

Query: 36  QKDNRDKKVKTIRFKIGDIKCASCAASIESVLGELSGVEKAMVSPLDGHAAISYIPEFVT 95
           Q +  DK  +  R +I  + C SC++++E  L  + GV+ A V+     A I Y P+ ++
Sbjct: 117 QDETNDKSAQVCRIQINGMTCTSCSSAVEQALQSIQGVQTAQVALATEEAEIHYDPKMLS 176

Query: 96  AQKIKETIEDAGFPVDEFPEQE-ISVCRLRIKGMACTSCSESVERALLMANGVKKAVVGL 154
             ++ E I++ GF        E I   +L++ G+   +    +E +L    GV+   +  
Sbjct: 177 YNQLLEAIDNTGFEAILISTGEYIDKIQLKVDGIWTYNSMRMIENSLQALPGVQSIDIDP 236

Query: 155 ALEEAKIHFDPNLTDTDHIVEAVEDAG---FGAEIISSGNDLNKAHLKLE 201
            L +  + + P +T   + ++ +E  G   F A I   G    ++H K E
Sbjct: 237 ELRKFSLSYKPEMTGPRNFIKVIESTGTGRFKAMIFPEGGGGRESHRKEE 286


>29840.m000632 copper-transporting atpase p-type, putative
          Length = 1001

 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 100/185 (54%), Gaps = 9/185 (4%)

Query: 44  VKTIRFKIGDIKCASCAASIESVLGELSGVEKAMVSPLDGHAAISYIPEFVTAQKIKETI 103
           ++ I+ ++G + CA+C+ S+ES LG ++GV +A V+ L   A + + P  V    IK  I
Sbjct: 62  MRRIQVRVGGMTCAACSNSVESALGCVNGVLRASVALLQNKADVVFDPSLVKDDDIKNAI 121

Query: 104 EDAGFPVDEFPE--------QEISVCRLRIKGMACTSCSESVERALLMANGVKKAVVGLA 155
           EDAGF  +   E         +  + +  I GM C +C  SVE  L    GVK+AVV LA
Sbjct: 122 EDAGFEAEILAEPSTLEAKPSKTLLGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALA 181

Query: 156 LEEAKIHFDPNLTDTDHIVEAVEDAGFGAEIISSGNDLNKAHLKLEGIKSTEDAAVIRFS 215
               ++ +DP +   D IV A+EDAGF   ++ S N  +K  L++ GI S  DA ++   
Sbjct: 182 TSLGEVEYDPTVISKDDIVNAIEDAGFEGSLVQS-NQQDKIILRVVGIFSEMDAQLLEGI 240

Query: 216 LESYR 220
           L + +
Sbjct: 241 LSTLK 245



 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 71/153 (46%)

Query: 31  IAVPKQKDNRDKKVKTIRFKIGDIKCASCAASIESVLGELSGVEKAMVSPLDGHAAISYI 90
           +A P   + +  K    +F IG + CA+C  S+E +L +L GV++A+V+       + Y 
Sbjct: 131 LAEPSTLEAKPSKTLLGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALATSLGEVEYD 190

Query: 91  PEFVTAQKIKETIEDAGFPVDEFPEQEISVCRLRIKGMACTSCSESVERALLMANGVKKA 150
           P  ++   I   IEDAGF        +     LR+ G+     ++ +E  L    GV++ 
Sbjct: 191 PTVISKDDIVNAIEDAGFEGSLVQSNQQDKIILRVVGIFSEMDAQLLEGILSTLKGVRQF 250

Query: 151 VVGLALEEAKIHFDPNLTDTDHIVEAVEDAGFG 183
                  E ++ FD  +  +  +V+ +E A  G
Sbjct: 251 RYNRMSSELEVEFDTEVIGSRLLVDGIEGASNG 283


>30190.m011198 copper-transporting atpase p-type, putative
          Length = 810

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)

Query: 123 LRIKGMACTSCSESVERALLMANGVKKAVVGLALEEAKIHFDPNLTDTDHIVEAVEDAGF 182
           + I G+  T+CS ++E+A       + + V +A EE+K+    N     +++EA +D GF
Sbjct: 1   MHIGGLT-TTCSFTIEQASQAFQSAQNSEVEIATEESKLQRHIN-----YLLEATDDPGF 54

Query: 183 GAEIISSGNDLNKAHLKLEGIKSTEDAAVIRFSLES 218
            A I SSG D N   LK++G+ +    AV++  L++
Sbjct: 55  RATIFSSGEDTNYLQLKVDGMLTDHSVAVVKNCLQA 90