Jatropha Genome Database

JcCB0495181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0495181.10 - phase: 0 
         (190 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008857 transketolase, putative                                 221   1e-58
28507.m000160 transketolase, putative                                 116   6e-27
31825.m000041 transketolase, putative                                 110   5e-25

>30174.m008857 transketolase, putative
          Length = 752

 Score =  221 bits (564), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 112/157 (71%), Positives = 120/157 (76%), Gaps = 5/157 (3%)

Query: 18  VSYYGSSQSSDHHRLSLSTPSLPAFSGLKXXXXXXXXXXXXXXXXXXX---XXXXXXXXX 74
           +S++ S+QSSD  RLSLSTPSLPAFSGLK                               
Sbjct: 18  ISHHVSTQSSD--RLSLSTPSLPAFSGLKSTSSSIPRATSSRRSRRNSSIPTARRLQTPT 75

Query: 75  XASVVETVDATTETSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKY 134
            A+ VET+D TT+TSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDE+MKY
Sbjct: 76  RAAAVETLDVTTDTSLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMKY 135

Query: 135 NPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK 171
           NPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK
Sbjct: 136 NPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK 172


>28507.m000160 transketolase, putative
          Length = 789

 Score =  116 bits (291), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 64/81 (79%)

Query: 92  EKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSA 151
            + V+ +R L +DAV+ A +GHPG+ +G A +G+ LY  VMKYNP NP WFNRDRFVLSA
Sbjct: 126 RRCVDNVRMLIVDAVQTAKAGHPGMALGMAEVGYYLYRHVMKYNPFNPTWFNRDRFVLSA 185

Query: 152 GHGCMLQYALLHLAGYDSVKV 172
           GHGC+LQY  LHLAG++SV++
Sbjct: 186 GHGCLLQYVCLHLAGFESVQL 206


>31825.m000041 transketolase, putative
          Length = 118

 Score =  110 bits (274), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 48/78 (61%), Positives = 62/78 (79%)

Query: 95  VNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHG 154
            N IRFLA+DAVEKANSGHPGLPMG A +  +L+ + ++++PKNP W +RDRFVLSAGHG
Sbjct: 2   ANAIRFLAMDAVEKANSGHPGLPMGMADVATVLFSKYLRFDPKNPLWPDRDRFVLSAGHG 61

Query: 155 CMLQYALLHLAGYDSVKV 172
            ML Y++L+L GY  + V
Sbjct: 62  SMLLYSVLYLTGYPDMTV 79