Jatropha Genome Database

JcCB0492351.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0492351.10 + phase: 1 /pseudo/partial
         (238 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29982.m000222 group II plp decarboxylase, putative                    469   e-133
29662.m000447 glutamate decarboxylase, putative                        51   5e-07

>29982.m000222 group II plp decarboxylase, putative
          Length = 471

 Score =  469 bits (1206), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 218/233 (93%), Positives = 228/233 (97%)

Query: 1   WFARLWEIEKDQYWGYITNCGTEGNLHGILVGREVLPDGILYASRESHYSVFKAARMYRM 60
           WFARLWEIE+++YWGYITNCGTEGNLHGILVGREV PDG+LYASRESHYSVFKAARMYRM
Sbjct: 142 WFARLWEIERNEYWGYITNCGTEGNLHGILVGREVFPDGVLYASRESHYSVFKAARMYRM 201

Query: 61  GCVKIDCLVSGEIDCADFKVKLLANKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFT 120
             VKIDCLVSGEIDCADFKVKLLANKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE GFT
Sbjct: 202 ESVKIDCLVSGEIDCADFKVKLLANKDKPAIINVNIGTTVKGAVDDLDLVIQTLEECGFT 261

Query: 121 HDRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQLTRLEHIN 180
            +RFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQ+TR+EHIN
Sbjct: 262 QNRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHIN 321

Query: 181 VLSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHY 233
           VLS+NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY+GFQK+VQKCLRNAHY
Sbjct: 322 VLSKNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKDVQKCLRNAHY 374


>29662.m000447 glutamate decarboxylase, putative
          Length = 529

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 12/145 (8%)

Query: 96  IGTTVKGAVDDLDLVIQTL----EESGFTHDRFYIHCDGALFGLMMPFVKRAPKVSFKKP 151
           +G+T+ G  +D+ L+ + L    EE+G+      IH D A  G + PFV    +  F+ P
Sbjct: 249 LGSTLTGEFEDVKLLSELLTKRNEETGWNTP---IHVDAASGGFIAPFVYPDLEWDFRLP 305

Query: 152 -IGSVSVSGHKFVGCPMPCG--VQLTRLEHINVLSRNVEYLASRDA--TIMGSRNGHAPI 206
            + S++VSGHK+       G  V  T+ +    L  ++ YL S     T+  S+     I
Sbjct: 306 LVKSINVSGHKYGLVYAGVGWVVWRTKEDLPEELIFHINYLGSDQPTFTLNFSKGSSQII 365

Query: 207 FLWYTLNRKGYRGFQKEVQKCLRNA 231
             +Y   R G+ G+++ ++ C+ NA
Sbjct: 366 AQYYQFIRLGFEGYKEIIENCMDNA 390