Jatropha Genome Database

JcCB0489251.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0489251.10 - phase: 0 
         (82 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29889.m003359 protein phosphatase 2c, putative                         74   1e-14

>29889.m003359 protein phosphatase 2c, putative
          Length = 375

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 3/70 (4%)

Query: 8  VAEAEIICSPSMPRVLDVQYHLQNLNVDVTVPSTPIFEAITTDISRFESVIIFVPLIFLR 67
          +AEAE+I  P    VLDVQYHLQNLNVDVT PSTPI ++I+ DISRFES +    +I   
Sbjct: 1  MAEAEVIYKPP---VLDVQYHLQNLNVDVTAPSTPILDSISADISRFESAVSCTEIINES 57

Query: 68 VFDFLFLRSF 77
            +   ++SF
Sbjct: 58 AIESSAVKSF 67