Jatropha Genome Database

JcCB0487491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0487491.10 + phase: 0 
         (202 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30066.m000716 mannose-6-phosphate isomerase, putative                 259   8e-70
29980.m000173 mannose-6-phosphate isomerase, putative                 121   2e-28

>30066.m000716 mannose-6-phosphate isomerase, putative
          Length = 446

 Score =  259 bits (661), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 127/189 (67%), Positives = 145/189 (76%), Gaps = 11/189 (5%)

Query: 1   MVSCSVYRSNDPMGKPSNDIIDDDXXXXXXXXXXXXXXXXXCSVQNYDWGIIGNNSQVAR 60
           MVSCSV   NDP  + +++++                    CSV NYDWGI+G NSQVAR
Sbjct: 1   MVSCSVNSVNDPTRETNDELLKQHKNVPKRLK---------CSVHNYDWGIVGKNSQVAR 51

Query: 61  LFALNSGSDICPNKPYAEFWIGTHESGPSFLDHGNAGFRSSLSLKSWILDNPILVLGDRV 120
           LF+LNSGSDI P KPYAEFWIGTH+SGPSF+DHGN     SLSLK WIL+NP  VLGD+V
Sbjct: 52  LFSLNSGSDIDPGKPYAEFWIGTHKSGPSFVDHGNGN--GSLSLKKWILENPYKVLGDKV 109

Query: 121 FEKWGGDLPFLLKVLSVEKALSIQAHPDKELARALHISQPNVYKDGNHKPEMALALTEFE 180
            +KWGGDLPFL KV+SV KALSIQAHPDKELA+ALH +QP++YKD NHKPEMALALTEFE
Sbjct: 110 MKKWGGDLPFLFKVISVGKALSIQAHPDKELAKALHKAQPSIYKDDNHKPEMALALTEFE 169

Query: 181 ALCGFISTK 189
           ALCGFIS K
Sbjct: 170 ALCGFISVK 178


>29980.m000173 mannose-6-phosphate isomerase, putative
          Length = 374

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 6/99 (6%)

Query: 42  CSVQNYDWGIIGNNSQVARLFALNSGSDICPNKPYAEFWIGTHESGPSFL-----DHGNA 96
           CSVQNY+WG IG++SQVA+L+ALNSGS+I  +KPYAE W+GTH+SGPSF+     ++G  
Sbjct: 15  CSVQNYNWGKIGSDSQVAKLYALNSGSEIEVDKPYAELWMGTHDSGPSFVVESGGENGIG 74

Query: 97  GFRSSLSLKSWILDNPILVLGDRVFEKWGGDLPFLLKVL 135
               SLSLK WI  NP  VLGD+V +KWG DLPFL K L
Sbjct: 75  IGSQSLSLKDWIAKNPN-VLGDKVLDKWGCDLPFLFKEL 112