Jatropha Genome Database

JcCB0480731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0480731.10 - phase: 0 /partial
         (100 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006986 alpha-2,8-sialyltransferase 8b, putative                202   2e-53
30147.m014429 alpha-2,8-sialyltransferase 8b, putative                102   3e-23

>30131.m006986 alpha-2,8-sialyltransferase 8b, putative
          Length = 448

 Score =  202 bits (515), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 97/100 (97%), Positives = 99/100 (99%)

Query: 1   KYAKHVGLKRDFRLVVRGAARNMVTILNGSTDEVLIIKSVTHRDFNAMIKSIPNPVYLFQ 60
           KYAKHVGLKR+FRLVVRGAARNMV ILNGSTDEVLIIKSVTHRDFNAMIK+IPNPVYLFQ
Sbjct: 219 KYAKHVGLKREFRLVVRGAARNMVKILNGSTDEVLIIKSVTHRDFNAMIKNIPNPVYLFQ 278

Query: 61  GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 100
           GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW
Sbjct: 279 GIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 318


>30147.m014429 alpha-2,8-sialyltransferase 8b, putative
          Length = 442

 Score =  102 bits (255), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 4/103 (3%)

Query: 2   YAKHVGLKRDFRLVVRGAARNM--VTILNGSTDEVLIIKSVTHRDFNAMIKSIP--NPVY 57
           Y ++ G K  FRL+ RG+A+ +  V  L+ +  E LIIK+  H   N MI+ +P  NPV+
Sbjct: 210 YTEYAGKKSTFRLLNRGSAKALDKVVELDETRKEALIIKTTIHDIMNKMIREVPINNPVH 269

Query: 58  LFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEW 100
           L  G      AKGTG+K++E ALS+CD VD+YGFTVDPGY EW
Sbjct: 270 LMLGASFGSAAKGTGLKALEFALSICDSVDMYGFTVDPGYKEW 312