Jatropha Genome Database

JcCB0478801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0478801.10 - phase: 0 /partial
         (312 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29822.m003474 conserved hypothetical protein                          473   e-134
30128.m009025 conserved hypothetical protein                          247   4e-66
29816.m000677 Auxin efflux carrier component, putative                210   8e-55
29662.m000472 Auxin efflux carrier component, putative                205   2e-53
27985.m000882 Auxin efflux carrier component, putative                185   2e-47
30180.m001064 Auxin efflux carrier component, putative                181   5e-46
29651.m000296 hypothetical protein                                    133   1e-31

>29822.m003474 conserved hypothetical protein
          Length = 313

 Score =  473 bits (1216), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/311 (82%), Positives = 280/311 (90%), Gaps = 3/311 (0%)

Query: 1   VAKFSIPLLSFQVISSNNPYKMNLKLILADFLQKILAVLVLTAITKISSRGRLNWVITGL 60
           VAKFSIPLLSFQVIS+NNPYKMNLKLI ADFLQK+LA LVL AITKISSRGRLNW+ITGL
Sbjct: 3   VAKFSIPLLSFQVISNNNPYKMNLKLIFADFLQKLLAALVLLAITKISSRGRLNWIITGL 62

Query: 61  SLSTLPNTLILGIPLLKAMYGEEADXXXXXXXXXXXXXWYNLLLFLFELNATYAAPVTPS 120
           SLSTLPNTLILGIPLLKAMYG EA+             WYNLLLFLFELNATYAAPV PS
Sbjct: 63  SLSTLPNTLILGIPLLKAMYGAEAEALSQIVVLQSLV-WYNLLLFLFELNATYAAPVAPS 121

Query: 121 SETTG--EAPEEAQLKEGEDETHTRPTRRVKTMLILLTVGKKLLRNPNFHATSLGLIWAS 178
           SETTG  EAP+EAQ KE EDET+T  TRR KTM+ILLTVGKKLLRNPNFHAT LGLIWAS
Sbjct: 122 SETTGDQEAPQEAQSKEEEDETNTSTTRRAKTMVILLTVGKKLLRNPNFHATLLGLIWAS 181

Query: 179 IHFRWEVKLPDVVDQSIRILSTGGLGMAMFSLGLFMASRTSIIACGIRMAIVSMAIKFIS 238
           +HFRW+VKLPD+VD+SIRILSTGGLGMAMFSLGLFMASR +IIACG+RMA++SM++KFIS
Sbjct: 182 VHFRWDVKLPDIVDKSIRILSTGGLGMAMFSLGLFMASRPNIIACGVRMAVLSMSMKFIS 241

Query: 239 GPALMAVSSFALVLKGTVFKVAIVQAALPQGIVPFVFAKEYNIHPDILSTGVIFGMLNAL 298
           GPA+MAV++ A+  +GTVFKVAIVQAALPQGIVPFVFAKEYNIHPDILSTGVIFGML AL
Sbjct: 242 GPAIMAVAALAVRARGTVFKVAIVQAALPQGIVPFVFAKEYNIHPDILSTGVIFGMLIAL 301

Query: 299 PIALAYYSLLA 309
           PIALAYYSLLA
Sbjct: 302 PIALAYYSLLA 312


>30128.m009025 conserved hypothetical protein
          Length = 357

 Score =  247 bits (631), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 127/308 (41%), Positives = 184/308 (59%)

Query: 1   VAKFSIPLLSFQVISSNNPYKMNLKLILADFLQKILAVLVLTAITKISSRGRLNWVITGL 60
           V  F++PL +F+  +  +P+KMN   I AD + K + V+VL    K SS+G   W IT  
Sbjct: 46  VCYFTLPLFTFEFTAHVDPFKMNYLFIGADAISKFIIVVVLACWAKFSSKGSYTWSITSF 105

Query: 61  SLSTLPNTLILGIPLLKAMYGEEADXXXXXXXXXXXXXWYNLLLFLFELNATYAAPVTPS 120
           SLSTL N+L++G+PL+KAMYG  A              W  +LLF+ E   T     + +
Sbjct: 106 SLSTLTNSLVVGVPLMKAMYGPMAVDLVVQSSVVQAIIWLTILLFVLEFRRTRLDISSSN 165

Query: 121 SETTGEAPEEAQLKEGEDETHTRPTRRVKTMLILLTVGKKLLRNPNFHATSLGLIWASIH 180
                +  E+     G        +      +++  VG KL  NPN +A  LGL+WA I 
Sbjct: 166 YNKNSDNLEKDLEGSGSAGNMAISSSGPSFWVLMKVVGVKLAMNPNSYACILGLVWAFIA 225

Query: 181 FRWEVKLPDVVDQSIRILSTGGLGMAMFSLGLFMASRTSIIACGIRMAIVSMAIKFISGP 240
            RW  ++P +++ SI I+S  G G AMFS+G+FMA +  +IACG  + +V M ++FI+GP
Sbjct: 226 NRWHFEMPSIMEGSILIMSKAGTGTAMFSMGIFMAVQEKVIACGAGLTVVGMILRFIAGP 285

Query: 241 ALMAVSSFALVLKGTVFKVAIVQAALPQGIVPFVFAKEYNIHPDILSTGVIFGMLNALPI 300
           A MA+ S A+ L G V +VAI+QAALPQ I  F+FAKEY +H ++LST VIFGM+ +LP+
Sbjct: 286 AAMAIGSIAVGLHGDVLRVAIIQAALPQSITSFIFAKEYGLHAEVLSTAVIFGMIVSLPV 345

Query: 301 ALAYYSLL 308
            +AYY++L
Sbjct: 346 LIAYYAIL 353


>29816.m000677 Auxin efflux carrier component, putative
          Length = 646

 Score =  210 bits (534), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 103/166 (62%), Positives = 131/166 (78%)

Query: 144 PTRRVKTMLILLTVGKKLLRNPNFHATSLGLIWASIHFRWEVKLPDVVDQSIRILSTGGL 203
           P   V T LIL+ V +KL+RNPN +++ +GL+W+ I FRW+V +P ++ QSI ILS  GL
Sbjct: 480 PPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIAFRWDVAMPAIIKQSISILSDAGL 539

Query: 204 GMAMFSLGLFMASRTSIIACGIRMAIVSMAIKFISGPALMAVSSFALVLKGTVFKVAIVQ 263
           GMAMFSLGLFMA +  IIACG  +A  +MA++F++GPA+MA +S A+ L+GT+ ++AIVQ
Sbjct: 540 GMAMFSLGLFMALQPKIIACGNSVAAFAMAVRFLTGPAVMAAASIAVGLRGTLLRIAIVQ 599

Query: 264 AALPQGIVPFVFAKEYNIHPDILSTGVIFGMLNALPIALAYYSLLA 309
           AALPQGIVPFVFAKEYN+HP ILST VIFGML ALPI L YY LL 
Sbjct: 600 AALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLG 645



 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/108 (53%), Positives = 72/108 (66%)

Query: 1   VAKFSIPLLSFQVISSNNPYKMNLKLILADFLQKILAVLVLTAITKISSRGRLNWVITGL 60
           VA F++PLLSF  IS+NNPY+MNL+ I AD LQKI+ ++ L   T ++  G L W+IT  
Sbjct: 46  VAIFAVPLLSFHFISTNNPYEMNLRFIAADTLQKIIMLVALGLWTNLTKNGSLEWMITIF 105

Query: 61  SLSTLPNTLILGIPLLKAMYGEEADXXXXXXXXXXXXXWYNLLLFLFE 108
           SLSTLPNTL++GIPLL AMY + A              WY LLLFLFE
Sbjct: 106 SLSTLPNTLVMGIPLLIAMYDKYAGSLMVQVVVLQCIIWYTLLLFLFE 153


>29662.m000472 Auxin efflux carrier component, putative
          Length = 635

 Score =  205 bits (521), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/176 (57%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 135 EGED--ETHTRPTRRVKTMLILLTVGKKLLRNPNFHATSLGLIWASIHFRWEVKLPDVVD 192
           EG D  + H  P   V T LI++ V +KL+RNPN +++  G++W+ I +RW +++P +V 
Sbjct: 460 EGGDGSKKHQMPPASVMTRLIIIMVWRKLIRNPNTYSSLFGVVWSLISYRWSIQMPSIVS 519

Query: 193 QSIRILSTGGLGMAMFSLGLFMASRTSIIACGIRMAIVSMAIKFISGPALMAVSSFALVL 252
            SI ILS  GLGMAMFSLGLFMA +  IIACG  +A  +MA++F++GPA++A +S A+ L
Sbjct: 520 GSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVATFAMAVRFLTGPAVIAATSIAIGL 579

Query: 253 KGTVFKVAIVQAALPQGIVPFVFAKEYNIHPDILSTGVIFGMLNALPIALAYYSLL 308
           +G +  VAIVQAALPQGIVPFVFAKEYN+H DILST VIFGML ALPI + YY LL
Sbjct: 580 RGPLLHVAIVQAALPQGIVPFVFAKEYNVHADILSTAVIFGMLIALPITILYYVLL 635



 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 83/154 (53%), Gaps = 16/154 (10%)

Query: 1   VAKFSIPLLSFQVISSNNPYKMNLKLILADFLQKILAVLVLTAITKISSRGRLNWVITGL 60
           VA F++PLLSF  ISSN+PY MN + I AD LQK++ +  L      S  G L W+IT  
Sbjct: 46  VAVFAVPLLSFHFISSNDPYAMNYRFIAADSLQKVVILAALFLWQAFSKSGSLEWMITLF 105

Query: 61  SLSTLPNTLILGIPLLKAMYGEEADXXXXXXXXXXXXXWYNLLLFLFELNA-----TYAA 115
           SLSTLPNTL++GIPLLKAMYGE +              WY L+LF+FE        +   
Sbjct: 106 SLSTLPNTLVMGIPLLKAMYGEFSGSLMVQIVVLQSVIWYTLMLFMFEYRGAKLLISEQF 165

Query: 116 PVTPSSETT-----------GEAPEEAQLKEGED 138
           P T  S T+           G  P +A  + G+D
Sbjct: 166 PETAGSITSFRVDSDVVSLNGREPLQADAEIGDD 199


>27985.m000882 Auxin efflux carrier component, putative
          Length = 544

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/170 (53%), Positives = 117/170 (68%)

Query: 120 SSETTGEAPEEAQLKEGEDETHTRPTRRVKTMLILLTVGKKLLRNPNFHATSLGLIWASI 179
            S  T  A EE  + +        P   V   LIL+ VG+KL RNPN +++ LGL+W+ I
Sbjct: 375 DSSKTPAADEEETIAKDATNVQEMPGALVMIRLILIVVGRKLSRNPNTYSSVLGLLWSLI 434

Query: 180 HFRWEVKLPDVVDQSIRILSTGGLGMAMFSLGLFMASRTSIIACGIRMAIVSMAIKFISG 239
            F+W V +P +V  SI+I+S  GLGMAMFSLGLFMA +  IIACG + A + MAI+FI G
Sbjct: 435 SFKWNVGMPSLVKNSIKIISDAGLGMAMFSLGLFMALQPRIIACGKKKATIGMAIRFICG 494

Query: 240 PALMAVSSFALVLKGTVFKVAIVQAALPQGIVPFVFAKEYNIHPDILSTG 289
           P +M+ +S A+ L+G   + AIVQAALPQGIVPFVFA+EY +HPDILSTG
Sbjct: 495 PVVMSAASVAVGLRGVRLRAAIVQAALPQGIVPFVFAREYGLHPDILSTG 544



 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 1   VAKFSIPLLSFQVISSNNPYKMNLKLILADFLQKILAVLVLTAITKISSRGRLNWVITGL 60
           VA F++P+LSF  IS NNPY+M+ K ILAD L K+L VL + ++  I   G L+W+IT  
Sbjct: 45  VAVFAVPVLSFHFISKNNPYQMDTKFILADTLSKVL-VLAVLSVWAIFFNGGLDWLITLF 103

Query: 61  SLSTLPNTLILGIPLLKAMYGEEADXXXXXXXXXXXXXWYNLLLFLFELNA 111
           S++TLPNTL++GIPLL AMYG+                WY LLLFLFE  A
Sbjct: 104 SVATLPNTLVMGIPLLMAMYGDFTQSLMVQVVVLQCIIWYTLLLFLFEYRA 154


>30180.m001064 Auxin efflux carrier component, putative
          Length = 613

 Score =  181 bits (458), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 117/155 (75%)

Query: 135 EGEDETHTRPTRRVKTMLILLTVGKKLLRNPNFHATSLGLIWASIHFRWEVKLPDVVDQS 194
           +GE      P   V T LIL+ V +KL+RNPN +++ +GL W+ + F+  +++P ++  S
Sbjct: 417 DGEPRATAMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKLHIEMPAIIAGS 476

Query: 195 IRILSTGGLGMAMFSLGLFMASRTSIIACGIRMAIVSMAIKFISGPALMAVSSFALVLKG 254
           I ILS  GLGMAMFSLGLFMA +  IIACG  +A  +MA++F++GPA+MA +SFA+ L+G
Sbjct: 477 IAILSNAGLGMAMFSLGLFMALQPRIIACGNSIATFAMAVRFLTGPAVMAAASFAVGLRG 536

Query: 255 TVFKVAIVQAALPQGIVPFVFAKEYNIHPDILSTG 289
            +  +AIVQAALPQGIVPFVFAKEYN+HPDILSTG
Sbjct: 537 VLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTG 571



 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 58/108 (53%), Positives = 73/108 (67%)

Query: 1   VAKFSIPLLSFQVISSNNPYKMNLKLILADFLQKILAVLVLTAITKISSRGRLNWVITGL 60
           VA F++PLLSF  IS+NNPY MN + I AD LQK++ + VL   ++ SSRG L W IT  
Sbjct: 46  VALFAVPLLSFHFISTNNPYAMNYRFIAADTLQKVIVLFVLAIWSRTSSRGSLEWSITLF 105

Query: 61  SLSTLPNTLILGIPLLKAMYGEEADXXXXXXXXXXXXXWYNLLLFLFE 108
           SLSTLPNTL++GIPLLK MYG+++              WY L+LFLFE
Sbjct: 106 SLSTLPNTLVMGIPLLKGMYGDDSGSLMVQIVVLQCIIWYTLMLFLFE 153


>29651.m000296 hypothetical protein
          Length = 97

 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/95 (69%), Positives = 79/95 (83%)

Query: 214 MASRTSIIACGIRMAIVSMAIKFISGPALMAVSSFALVLKGTVFKVAIVQAALPQGIVPF 273
           MA +  IIACG  +A  +MA++F++GPA+MA +S A+ L+GT+  VAIVQAALPQGIVPF
Sbjct: 1   MALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPF 60

Query: 274 VFAKEYNIHPDILSTGVIFGMLNALPIALAYYSLL 308
           VFAKEYN+HPDILSTGVIFGML ALPI L YY LL
Sbjct: 61  VFAKEYNVHPDILSTGVIFGMLIALPITLVYYILL 95