Jatropha Genome Database

JcCB0476701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0476701.10 + phase: 0 /partial
         (159 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30167.m000859 2,3-bisphosphoglycerate-independent phosphoglycera...   275   9e-75

>30167.m000859 2,3-bisphosphoglycerate-independent phosphoglycerate
           mutase, putative
          Length = 478

 Score =  275 bits (702), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 132/158 (83%), Positives = 142/158 (89%)

Query: 1   AIDDAGHDKASVFKVKGLEAVDQAIGQLAKLLWQAESTGKFQYFLCVTGDHSTPVEYGDH 60
           AIDDAGHDKAS+FKVKGLEAVD+AIGQLAKLLWQAESTG FQYFLCVTGDHSTPVEYGDH
Sbjct: 320 AIDDAGHDKASIFKVKGLEAVDRAIGQLAKLLWQAESTGNFQYFLCVTGDHSTPVEYGDH 379

Query: 61  SFEPVPFAMSPLQDFVAAVGGESIVMATSLESFPLPTVKAGEDLKDTKTEKERASKQLKA 120
           SFEPVPFAM  L DFV AVGGES ++ATSLE FPLPT+KAGEDL++ K  KE  +++LKA
Sbjct: 380 SFEPVPFAMCRLTDFVGAVGGESNIVATSLEPFPLPTIKAGEDLEEDKMPKESGNQELKA 439

Query: 121 FSGDSVCEFSEIAAARGCLGRFPGGEMMGVIKAFLSLK 158
           F GDSVCEFSEIAAARGCLGRF GGEMMGVIKAFL L 
Sbjct: 440 FGGDSVCEFSEIAAARGCLGRFQGGEMMGVIKAFLKLN 477