Jatropha Genome Database

JcCB0470521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0470521.10 + phase: 0 
         (86 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014385 rac gtpase, putative                                    114   9e-27
28962.m000460 rac gtpase, putative                                    113   2e-26
29602.m000209 rac gtpase, putative                                    110   2e-25
29646.m001113 rac gtpase, putative                                    104   1e-23
29900.m001556 rac gtpase, putative                                    102   3e-23
29912.m005491 rac gtpase, putative                                     92   4e-20
30147.m013989 rac gtpase, putative                                     91   2e-19
29709.m001184 rac gtpase, putative                                     86   4e-18

>30170.m014385 rac gtpase, putative
          Length = 197

 Score =  114 bits (285), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 61/77 (79%), Positives = 65/77 (84%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
           +LR+D QFFIDHPGA PITTAQGEELRKLIGAPAYIECSSK+QQNVK VFDAAIKVVLQP
Sbjct: 121 DLREDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKSQQNVKAVFDAAIKVVLQP 180

Query: 70  PXXXXXXXXGQTSCSIL 86
           P        GQ +CSIL
Sbjct: 181 PKQRKKKKKGQKACSIL 197


>28962.m000460 rac gtpase, putative
          Length = 197

 Score =  113 bits (282), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/77 (76%), Positives = 63/77 (81%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
           +LRDD QFF+DHPGA PITTAQGEELRKLIGAPAYIECSSKTQQNVK VFD AI+VVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDQAIRVVLQP 180

Query: 70  PXXXXXXXXGQTSCSIL 86
           P         Q +CSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197


>29602.m000209 rac gtpase, putative
          Length = 198

 Score =  110 bits (274), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 52/58 (89%), Positives = 53/58 (91%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVL 67
           +LRDD QF IDHPGA PITTAQGEELRKLIGAP YIECSSKTQQNVK VFDAAIKVVL
Sbjct: 121 DLRDDKQFLIDHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL 178


>29646.m001113 rac gtpase, putative
          Length = 197

 Score =  104 bits (259), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 58/77 (75%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
           +LRDD Q+ IDHPGA PIT AQGEEL+K++GA  YIECSSKTQQNVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQYLIDHPGATPITAAQGEELKKMVGAAVYIECSSKTQQNVKAVFDAAIKVVLQP 180

Query: 70  PXXXXXXXXGQTSCSIL 86
           P         + SC  L
Sbjct: 181 PKPKKKKRKARPSCFFL 197


>29900.m001556 rac gtpase, putative
          Length = 197

 Score =  102 bits (255), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 59/77 (76%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
           +LR D Q+ IDHPGA PITTAQGEELRK+IGA  YIECSSKTQQNVK VFD+AIKV L+P
Sbjct: 121 DLRQDKQYLIDHPGATPITTAQGEELRKIIGAITYIECSSKTQQNVKTVFDSAIKVALRP 180

Query: 70  PXXXXXXXXGQTSCSIL 86
           P         ++SCS L
Sbjct: 181 PKPKKKPRKQKSSCSFL 197


>29912.m005491 rac gtpase, putative
          Length = 209

 Score = 92.4 bits (228), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 48/61 (78%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 69
           +LRDD  +  DH     IT+AQGEELRK IGA AYIECSSKTQQNVK VFD AIKVVLQP
Sbjct: 121 DLRDDRGYLADHMNFNVITSAQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQP 180

Query: 70  P 70
           P
Sbjct: 181 P 181


>30147.m013989 rac gtpase, putative
          Length = 211

 Score = 90.5 bits (223), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 40/58 (68%), Positives = 47/58 (81%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVL 67
           +LR+D  +  DHPG  P+TT QGEELRK IGA  Y+ECSSKTQQNVK VFDA+IKVV+
Sbjct: 123 DLREDKHYLADHPGLTPVTTTQGEELRKQIGAAYYVECSSKTQQNVKAVFDASIKVVI 180


>29709.m001184 rac gtpase, putative
          Length = 202

 Score = 85.9 bits (211), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 41/59 (69%), Positives = 48/59 (81%)

Query: 10  NLRDDDQFFIDHPGAAPITTAQGEELRKLIGAPAYIECSSKTQQNVKGVFDAAIKVVLQ 68
           +LR+D QF +D+PGA  I+  QG EL+K IGA AY+ECSSKTQQNVK VFDAAIK VLQ
Sbjct: 127 DLREDGQFHLDYPGACTISREQGIELKKQIGALAYVECSSKTQQNVKAVFDAAIKAVLQ 185