Jatropha Genome Database

JcCB0467871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0467871.10 - phase: 0 /partial
         (143 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002224 cytochrome P450, putative                               192   6e-50
29724.m000853 cytochrome P450, putative                                65   1e-11
30128.m009010 cytochrome P450, putative                                58   1e-09

>30078.m002224 cytochrome P450, putative
          Length = 552

 Score =  192 bits (487), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 109/146 (74%), Positives = 122/146 (83%), Gaps = 9/146 (6%)

Query: 1   MASLSSISLPTFSISKPTATTSTLIPKPHFLIIKSSLENKTPKPASDTAKPSSWVSPNWL 60
             S S +S+P   + KP    + L  KPHF+ IKSSL+NKTPKP S+  KPSSWVSP+WL
Sbjct: 7   FVSFSHLSVP---LIKPA---TILTSKPHFISIKSSLDNKTPKPNSNNTKPSSWVSPDWL 60

Query: 61  TSLTRTLTLGQ-NDNSGIPIASAKLEDVSDLLGGALFLPLFKWMNEYGPIYRLAAGPRNF 119
           TSLT+TLTL Q +D+SGIPIASAKLEDVSDLLGGALFLPLFKWMNEYGPIYRLAAGPRNF
Sbjct: 61  TSLTKTLTLNQKHDDSGIPIASAKLEDVSDLLGGALFLPLFKWMNEYGPIYRLAAGPRNF 120

Query: 120 VVVSDPAIAKHLLKNY--GKYGKGLV 143
           VVVSDPAIAKH+L+NY  GKY KGLV
Sbjct: 121 VVVSDPAIAKHVLRNYGDGKYAKGLV 146


>29724.m000853 cytochrome P450, putative
          Length = 555

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 9/87 (10%)

Query: 58  NWLTSLTRTLTLGQNDNSGIPIASAKLEDVSDLLGGALFLPLFKWMNEYGPIYRLAAGPR 117
           N LTS     +LG      +PIA      VSDL    LF  L+ W  E+G +Y+LA GP+
Sbjct: 44  NLLTSFLSGGSLG-----SMPIAEGA---VSDLFNRPLFFSLYDWFLEHGSVYKLAFGPK 95

Query: 118 NFVVVSDPAIAKHLLK-NYGKYGKGLV 143
            FVVVSDP +A+H+L+ N   Y KG++
Sbjct: 96  AFVVVSDPIVARHILRENAFSYDKGVL 122


>30128.m009010 cytochrome P450, putative
          Length = 632

 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 42/58 (72%), Gaps = 1/58 (1%)

Query: 87  VSDLLGGALFLPLFKWMNEYGPIYRLAAGPRNFVVVSDPAIAKHLLKNYGK-YGKGLV 143
           +S +   A F+PL++    YG I+RL  GP++F++VSDP+IAKH+L++  K Y KG++
Sbjct: 143 ISAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGIL 200