Jatropha Genome Database

JcCB0467821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0467821.10 - phase: 0 /partial
         (395 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29728.m000797 Carbamoyl-phosphate synthase small chain, putative      640   0.0  
29968.m000660 Anthranilate synthase component II, putative             72   3e-13
29434.m000029 Anthranilate synthase component II, putative             62   6e-10

>29728.m000797 Carbamoyl-phosphate synthase small chain, putative
          Length = 418

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/325 (94%), Positives = 314/325 (96%), Gaps = 1/325 (0%)

Query: 32  YQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSISTSNWRCTKTL 91
           YQEILTDPSYAGQFVLMTNPHIGNTGVNF DEES QCFLAGLVIRSLSI TSNWRCTKTL
Sbjct: 94  YQEILTDPSYAGQFVLMTNPHIGNTGVNFGDEESTQCFLAGLVIRSLSIGTSNWRCTKTL 153

Query: 92  GDYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLSTEDSKTDEELLQMSKSWDIVGVDLI 151
           GDYLAERNIMGIYDVDTRAITRRLR+DGSLIGVLSTEDSKTDEELL+MS+SWDIVGVDLI
Sbjct: 154 GDYLAERNIMGIYDVDTRAITRRLREDGSLIGVLSTEDSKTDEELLKMSRSWDIVGVDLI 213

Query: 152 SDVSCTSPYEWVDQTNPEWDFNSEG-SGEVYHVVAYDFGIKHNILRRLASYGCKITVVPS 210
           SDVSCT+PY+WVD TN EWDFNS G  GEV+HVVAYDFGIKHNILRRLASYGCKITVVPS
Sbjct: 214 SDVSCTAPYKWVDPTNSEWDFNSNGREGEVFHVVAYDFGIKHNILRRLASYGCKITVVPS 273

Query: 211 KWPALETLKLKPDGVLFSNGPGDPSAVPYAVQTVKELLGKVPVFGICMGHQLLGQALGGK 270
           KWPALETLKLKPDGVLFSNGPGDPSAVPYAV+TVKELLGKVPVFGICMGHQLLGQALGGK
Sbjct: 274 KWPALETLKLKPDGVLFSNGPGDPSAVPYAVETVKELLGKVPVFGICMGHQLLGQALGGK 333

Query: 271 TFKMKFGHHGGNHPVRNVRQNRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAY 330
           TFKMKFGHHGGNHPVRNVR NRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAY
Sbjct: 334 TFKMKFGHHGGNHPVRNVRHNRVEISAQNHNYAVDPASLPEGVEVTHINLNDGSCAGLAY 393

Query: 331 PALNIMSLQYHPEASPGPHDSDMGK 355
           P LNIMSLQYHPEASPGPHDSD GK
Sbjct: 394 PVLNIMSLQYHPEASPGPHDSDTGK 418


>29968.m000660 Anthranilate synthase component II, putative
          Length = 281

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 12/165 (7%)

Query: 192 HNILRRLASYGCKITVVPSKWPALETLKLK-PDGVLFSNGPGDPSAVPYAVQTVKELLGK 250
           +N+ + +   GC   V  +    +E LK K P GVL S GPG+P     +++TV EL   
Sbjct: 91  YNLCQYMGELGCYFEVYRNDELTVEELKRKNPRGVLISPGPGEPRDSGISLETVLELGPL 150

Query: 251 VPVFGICMGHQLLGQALGGKTFKMKFG-HHGGNHPVRNVRQNRVEI---------SAQNH 300
           VP+FG+CMG Q +G+A GGK  +  +G  HG + PV    +    +         + + H
Sbjct: 151 VPLFGVCMGLQCIGEAFGGKIVRSPYGVMHGKSSPVYYDEKGEDGLFSGLSNPFTAGRYH 210

Query: 301 NYAVDPASLP-EGVEVTHINLNDGSCAGLAYPALNIMSLQYHPEA 344
           +  ++  S P E +E+T    +    A       ++  +Q+HPE+
Sbjct: 211 SLVIENDSFPTEELEITAWTEDGLIMAARHKKYKHLQGVQFHPES 255


>29434.m000029 Anthranilate synthase component II, putative
          Length = 188

 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 11/175 (6%)

Query: 186 YDFGIKHNILRRLASYGCKITVVPSKWPALETLKLKPDGVLFSNGPGDPSAVPYAVQTVK 245
           YD    +N+ + L+ +   I V+ ++ P L  +  K + ++ S GPG P       + ++
Sbjct: 8   YD-SFTYNLAQYLSEFDETI-VLYNQDPNLYDMAKKANALVLSPGPGWPKEANQMPKLIQ 65

Query: 246 ELLGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRN------VRQNRVEISAQN 299
           +     P+ G+C+GHQ + + LGG     K   HG    +         R    EI+   
Sbjct: 66  DFYQTKPILGVCLGHQAIAETLGGTLRLAKRVMHGRQSTIETQGPSSLFRSLPQEITVMR 125

Query: 300 -HNYAVDPASLPEGVEVTHINLNDGSCAGLAYPALNIMSLQYHPEASPGPHDSDM 353
            H+  VD   LP+G  VT  + +D       +  L +  LQ+HPE+   P    M
Sbjct: 126 YHSIVVD--QLPKGFSVTARDCDDQEIMAFEHHTLPLFGLQFHPESIGTPDGMTM 178