Jatropha Genome Database

JcCB0465701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0465701.10 - phase: 0 /partial
         (114 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m004052 heat shock protein binding protein, putative            173   2e-44
29736.m002114 altered response to gravity (arg1), plant, putative      51   1e-07
30120.m000367 chaperone protein DNAj, putative                         46   3e-06

>30138.m004052 heat shock protein binding protein, putative
          Length = 682

 Score =  173 bits (438), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 92/99 (92%)

Query: 16  PSLIKAYAVPFFLFAVSIFYQLVVLPRSFPPSHYDVLGIKRFSSIEEVKDAYEKLSSKWN 75
           PS +KAYAVPFFLFA+SIFYQLVVLPRSFP SHYDVL IKR+SSIEEV++AYEKLSSKWN
Sbjct: 5   PSAVKAYAVPFFLFALSIFYQLVVLPRSFPLSHYDVLRIKRYSSIEEVENAYEKLSSKWN 64

Query: 76  SSAEVPSAADFIEIQYAYELLKNPLWKRDYDIFGIDEQL 114
           +  +VP+A DF+EIQYAYELLKNPLWKRDYD+F IDEQL
Sbjct: 65  AGDKVPTAVDFLEIQYAYELLKNPLWKRDYDLFNIDEQL 103


>29736.m002114 altered response to gravity (arg1), plant, putative
          Length = 410

 Score = 50.8 bits (120), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)

Query: 49  YDVLGIKRFSSIEEVKDAYEKLSSKW--NSSAEVPSAAD-FIEIQYAYELLKNPLWKRDY 105
           Y+VLG+ R S+ +E+K AY K++ K+  + +A  P AAD F E+ ++Y +L +P  +R Y
Sbjct: 22  YEVLGVSRNSTDQEIKTAYRKMALKYHPDKNANDPEAADMFKEVTFSYNILSDPDKRRQY 81

Query: 106 DIFGID 111
           D  G +
Sbjct: 82  DSAGFE 87


>30120.m000367 chaperone protein DNAj, putative
          Length = 216

 Score = 46.2 bits (108), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 13/97 (13%)

Query: 23  AVPFFLFAVSIFYQLVVLPRSFPPSHYDVLGIKRFSSIEEVKDAYEKLSSKWNSSAEVPS 82
           A P    A ++   + V   SF    YD+LGI    ++ E+K AY++L+ K++     P 
Sbjct: 57  ATPVKASAAAVSDSIYVNTESF----YDLLGISETGTVSEIKKAYKQLARKYHPDVSPPG 112

Query: 83  AAD-----FIEIQYAYELLKNP----LWKRDYDIFGI 110
             +     FI++Q AYE L +P    L+ RD    G+
Sbjct: 113 KTEEYTKRFIQVQEAYETLSDPERRALYDRDMSRGGL 149