Jatropha Genome Database

JcCB0465031.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0465031.10 - phase: 1 /pseudo/partial
         (251 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29844.m003244 5-methyltetrahydrofolate:homocysteine methyltransf...   360   e-100
29703.m001481 5-methyltetrahydrofolate:homocysteine methyltransf...   329   6e-91
27524.m000295 5-methyltetrahydrofolate:homocysteine methyltransf...   231   3e-61

>29844.m003244 5-methyltetrahydrofolate:homocysteine
           methyltransferase, putative
          Length = 348

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/233 (75%), Positives = 192/233 (82%)

Query: 6   QVHLDYLDAGANIILTASYQATIQGFEAKGLSXXXXXXXXXXSVEIACEAREIYYDNCSK 65
           +VHLDY+DAGANIILTASYQATIQGFEAKGLS          SVEIACEAREIYYDNC+K
Sbjct: 60  RVHLDYIDAGANIILTASYQATIQGFEAKGLSTEEAEQLLRRSVEIACEAREIYYDNCTK 119

Query: 66  SSWDFMESGNVTRRPILVAASIGSYGAYLADGSEYSGNYGDSVSLQTLKDFHRRRLQILA 125
            SWD ME G ++R P+LVAASIGSYGAYLADGSEYSG+YGD+VS+QTLKDFHRRRLQILA
Sbjct: 120 GSWDLMEDGKMSRHPVLVAASIGSYGAYLADGSEYSGDYGDAVSIQTLKDFHRRRLQILA 179

Query: 126 KAGADIIAFETIPNXXXXXXXXXXXXXXDIKIPAWFSFNSKDGINVVSGDSISECASIAD 185
           K+GAD+IAFETIPN               I IPAWFSFNSKDGINVVSGDSI ECASIAD
Sbjct: 180 KSGADLIAFETIPNKLEAKAYAELLEEEGINIPAWFSFNSKDGINVVSGDSILECASIAD 239

Query: 186 SCKQLVAVGINCTPPRFIRELILSIAKVTNKPVVIYPNSGETYDAERKIWVVS 238
           S KQ+VAVGINCTPPRFI  LILS+ + T+KP+VIYPNSGETYDA  K WV S
Sbjct: 240 SSKQVVAVGINCTPPRFIHGLILSMREATSKPIVIYPNSGETYDAALKQWVKS 292


>29703.m001481 5-methyltetrahydrofolate:homocysteine
           methyltransferase, putative
          Length = 343

 Score =  329 bits (844), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 158/231 (68%), Positives = 187/231 (80%), Gaps = 1/231 (0%)

Query: 7   VHLDYLDAGANIILTASYQATIQGFEAKGLSXXXXXXXXXXSVEIACEAREIYYDNCSKS 66
           VHLDYL+AGA+II+TASYQATIQGFEAKG S          SVEIACEARE+Y+D C   
Sbjct: 61  VHLDYLEAGADIIITASYQATIQGFEAKGFSSAESEALLKKSVEIACEAREVYHDKCLAG 120

Query: 67  SWDFMESGNV-TRRPILVAASIGSYGAYLADGSEYSGNYGDSVSLQTLKDFHRRRLQILA 125
           + D    G V  +RPILVAAS+GSYGAYLADGSEYSG+YG++V+L TLKDFHRRR+Q+LA
Sbjct: 121 ACDDNNDGRVLKKRPILVAASVGSYGAYLADGSEYSGDYGEAVTLGTLKDFHRRRVQVLA 180

Query: 126 KAGADIIAFETIPNXXXXXXXXXXXXXXDIKIPAWFSFNSKDGINVVSGDSISECASIAD 185
           +AGAD+IAFET+PN              DIK+PAWFSFNSKDGINVVSGDS+ ECASIA+
Sbjct: 181 EAGADLIAFETVPNRVEAQAYAELLEEEDIKVPAWFSFNSKDGINVVSGDSLLECASIAE 240

Query: 186 SCKQLVAVGINCTPPRFIRELILSIAKVTNKPVVIYPNSGETYDAERKIWV 236
           SC++++AVGINCTPP FI  LILSI KVT+KP++IYPNSGE+YDA+RK WV
Sbjct: 241 SCRKVIAVGINCTPPSFIHGLILSIKKVTSKPILIYPNSGESYDADRKEWV 291


>27524.m000295 5-methyltetrahydrofolate:homocysteine
           methyltransferase, putative
          Length = 327

 Score =  231 bits (588), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 119/242 (49%), Positives = 153/242 (63%), Gaps = 19/242 (7%)

Query: 6   QVHLDYLDAGANIILTASYQATIQGFEAKGLSXXXXXXXXXXSVEIACEAREIYYDNCSK 65
           +VHL+YL+AGA+I++T+SYQAT+ GF +KGL+          SV++A EAR+ ++D    
Sbjct: 57  RVHLEYLEAGADILVTSSYQATLPGFMSKGLTIEEGELLLKKSVKLAIEARDKFWDA--- 113

Query: 66  SSWDFMESGNVTRRPI------LVAASIGSYGAYLADGSEYSGNYGDSVSLQTLKDFHRR 119
                     V R P+      LVAASIGSYGAYLADGSEYSG YG  V+L+ LKDFHR 
Sbjct: 114 ----------VKRNPLHRYNRALVAASIGSYGAYLADGSEYSGYYGPDVNLEKLKDFHRH 163

Query: 120 RLQILAKAGADIIAFETIPNXXXXXXXXXXXXXXDIKIPAWFSFNSKDGINVVSGDSISE 179
           RLQ+LA+AG D++AFETIPN              +IKIP+W  F+S DG N  SG+S  E
Sbjct: 164 RLQVLAEAGPDLLAFETIPNKLEAEACVELLEEENIKIPSWICFSSVDGENAPSGESFQE 223

Query: 180 CASIADSCKQLVAVGINCTPPRFIRELILSIAKVTNKPVVIYPNSGETYDAERKIWVVSY 239
           C  + +   ++VA GINC PP FI  LI    K+T K VV+YPNSGE +D   K W+ S 
Sbjct: 224 CLDVINKSNKVVAAGINCAPPHFIESLICKFKKLTQKFVVVYPNSGEIWDGRAKRWLPSA 283

Query: 240 IF 241
            F
Sbjct: 284 CF 285