Jatropha Genome Database

JcCB0461221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0461221.10 + phase: 2 /partial
         (270 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative      439   e-124
30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative      353   4e-98
30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative      226   6e-60
30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative      225   2e-59
30169.m006270 glyceraldehyde 3-phosphate dehydrogenase, putative      223   9e-59
37452.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative      181   4e-46
47543.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative      170   8e-43

>30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 404

 Score =  439 bits (1129), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/270 (81%), Positives = 225/270 (83%)

Query: 1   ISVDGKVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGK 60
           ISVDGKVI+VVSDRNP NLPW  +GIDLVIEGTGVFVDR+GAGKHIQAGAKKVLITAPGK
Sbjct: 135 ISVDGKVIQVVSDRNPANLPWKDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK 194

Query: 61  GDIPTYVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ 120
           GDIPTYVVGVNAD Y+  EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ
Sbjct: 195 GDIPTYVVGVNADGYSADEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ 254

Query: 121 XXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXXX 180
                             NIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPN       
Sbjct: 255 RLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLV 314

Query: 181 XXXSKKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGDD 240
               KKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRC          LTMVMGDD
Sbjct: 315 VQVEKKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDD 374

Query: 241 MVKVIAWYDNEWGYSQRVVDLADIVANNWK 270
           MVKVIAWYDNEWGYSQRVVDLADIVANNWK
Sbjct: 375 MVKVIAWYDNEWGYSQRVVDLADIVANNWK 404


>30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 458

 Score =  353 bits (907), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 187/278 (67%), Positives = 206/278 (74%), Gaps = 9/278 (3%)

Query: 1   ISVDGKVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGK 60
           ISVDGK IKVVS+R+P+ LPW  +GID+VIEGTGVFVD  GAGKHIQAGAKKV+ITAP K
Sbjct: 151 ISVDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK 210

Query: 61  G-DIPTYVVGVNADAY-NPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTG 118
           G DIPTYVVGVN   Y +    I+SNASCTTNCLAPFVKV+D++FGI+KGTMTTTHSYTG
Sbjct: 211 GADIPTYVVGVNEKDYSHEVANIVSNASCTTNCLAPFVKVMDEEFGIVKGTMTTTHSYTG 270

Query: 119 D------QXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTP 172
           D      Q                  NIVPTSTGAAKAV+LVLP LKGKLNGIALRVPTP
Sbjct: 271 DXSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTP 330

Query: 173 NXXXXXXXXXXSKKTF-AEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXX 231
           N           KK   AE+VNAAFR++A+  LKGIL VCD PLVSVDFRC         
Sbjct: 331 NVSVVDLVVNVEKKGLTAEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSSTIDS 390

Query: 232 XLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 269
            LTMVMGDDMVKV+AWYDNEWGYSQRVVDLA +VA  W
Sbjct: 391 SLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVAAKW 428


>30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 295

 Score =  226 bits (577), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 120/263 (45%), Positives = 153/263 (58%), Gaps = 2/263 (0%)

Query: 6   KVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPT 65
           K + V   RNP  +PWG  G D V+E TGVF D+D A  H++ GAKKV+I+AP K D P 
Sbjct: 32  KAVTVFGFRNPEEIPWGQSGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPM 90

Query: 66  YVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX 125
           +V+GVN   Y     I+SNASCTTNCLAP  KV+  KFGI +G MTT HS T  Q     
Sbjct: 91  FVMGVNEKDYKSDLNIVSNASCTTNCLAPLAKVIHDKFGIAEGLMTTVHSITATQKTVDG 150

Query: 126 XXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXXXXXXS 184
                         NI+P+STGAAKAV  VLP L GKL G+A RVPT +           
Sbjct: 151 PSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLE 210

Query: 185 KKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGDDMVKV 244
           KK   E++ AA +  ++ +LKGIL   DE +VS DF              + + D+ VK+
Sbjct: 211 KKATYEDIKAAIKAESEGKLKGILGYTDEDVVSSDFVGDSRSSIFDAKAGIALNDNFVKL 270

Query: 245 IAWYDNEWGYSQRVVDLADIVAN 267
           ++WYDNEWGYS RV+DL   +A+
Sbjct: 271 VSWYDNEWGYSSRVIDLIRHIAS 293


>30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 337

 Score =  225 bits (573), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/263 (44%), Positives = 155/263 (58%), Gaps = 2/263 (0%)

Query: 6   KVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPT 65
           K + V   RNP  +PW   G + ++E TGVF D+D A  H++ GAKKV+I+AP K D P 
Sbjct: 74  KPVTVFGVRNPEEIPWAETGAEYIVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPM 132

Query: 66  YVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX 125
           +VVGVN   Y P   IISNASCTTNCLAP  KV++ +FGI++G MTT HS T  Q     
Sbjct: 133 FVVGVNEKEYTPDLHIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDG 192

Query: 126 XXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXXXXXXS 184
                         NI+P+STGAAKAV  VLP+L GKL G++ RVPT +           
Sbjct: 193 PSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRLE 252

Query: 185 KKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGDDMVKV 244
           K    E++ AA +E ++ +LKGIL   ++ +VS DF              + + D  VK+
Sbjct: 253 KSATYEQIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDKRSSIFDAKAGIALNDKFVKL 312

Query: 245 IAWYDNEWGYSQRVVDLADIVAN 267
           ++WYDNEWGYS RVVDL   VA+
Sbjct: 313 VSWYDNEWGYSTRVVDLIVHVAS 335


>30169.m006270 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 426

 Score =  223 bits (567), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 119/267 (44%), Positives = 156/267 (58%), Gaps = 2/267 (0%)

Query: 1   ISVDGKVIKVVSDRNPVNLPWGGVGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGK 60
           + ++GK IKV S R+P  +PWG  G + V+E +GVF   D A  H + GAKKV+I+AP  
Sbjct: 155 LEINGKQIKVSSKRDPAEIPWGDHGAEYVVEASGVFTTIDKASAHKKGGAKKVVISAPS- 213

Query: 61  GDIPTYVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ 120
            D P +VVGVN   Y P   I+SNASCTTNCLAP  KV+ ++FGI++G MTT H+ T  Q
Sbjct: 214 ADAPMFVVGVNEQTYKPNMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQ 273

Query: 121 XXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXX 179
                              NI+P+STGAAKAV  VLP L GKL G+A RVPTPN      
Sbjct: 274 KTVDGPSMKDWRGGRGAGQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDL 333

Query: 180 XXXXSKKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGD 239
                K    E+V AA + +++  LKGIL   DE +VS DF              + +  
Sbjct: 334 TCRLEKSASYEDVKAAIKYASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSA 393

Query: 240 DMVKVIAWYDNEWGYSQRVVDLADIVA 266
             +K+++WYDNEWGYS RV+DL + +A
Sbjct: 394 AFMKLVSWYDNEWGYSNRVLDLIEHMA 420


>37452.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 193

 Score =  181 bits (458), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 93/132 (70%), Positives = 100/132 (75%), Gaps = 1/132 (0%)

Query: 139 NIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXXXXXXSKKTF-AEEVNAAFR 197
           NIVPTSTGAAKAV+LVLP LKGKLNGIALRVPTPN           KK   AE+VNAAFR
Sbjct: 32  NIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGLTAEDVNAAFR 91

Query: 198 ESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGDDMVKVIAWYDNEWGYSQR 257
           ++A+  LKGIL VCD PLVSVDFRC          LTMVMGDDMVKV+AWYDNEWGYSQR
Sbjct: 92  KAAEGPLKGILDVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQR 151

Query: 258 VVDLADIVANNW 269
           VVDLA +VA  W
Sbjct: 152 VVDLAHLVAAKW 163


>47543.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 206

 Score =  170 bits (430), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 91/203 (44%), Positives = 117/203 (57%), Gaps = 1/203 (0%)

Query: 66  YVVGVNADAYNPAEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX 125
           +VVGVN   Y P   IISNASCTTNCLAP  KV++ +FGI++G MTT HS T  Q     
Sbjct: 2   FVVGVNEKEYTPDLHIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDG 61

Query: 126 XXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNXXXXXXXXXXS 184
                         NI+P+STGAAKAV  VLP+L GKL G+A RVPT +           
Sbjct: 62  PSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVPTVDVSVVDLTVRLE 121

Query: 185 KKTFAEEVNAAFRESADKELKGILSVCDEPLVSVDFRCXXXXXXXXXXLTMVMGDDMVKV 244
           K    E++ AA +E ++ +LKGIL   ++ +VS DF              + + D  VK+
Sbjct: 122 KSATYEQIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDKRSSIFDAKAGIALNDKFVKL 181

Query: 245 IAWYDNEWGYSQRVVDLADIVAN 267
           ++WYDNEWGYS RVVDL   VA+
Sbjct: 182 VSWYDNEWGYSTRVVDLIVHVAS 204