Jatropha Genome Database

JcCB0459841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0459841.10 - phase: 0 
         (182 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006986 alpha-2,8-sialyltransferase 8b, putative                273   4e-74
30147.m014429 alpha-2,8-sialyltransferase 8b, putative                100   4e-22

>30131.m006986 alpha-2,8-sialyltransferase 8b, putative
          Length = 448

 Score =  273 bits (697), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 129/161 (80%), Positives = 140/161 (86%), Gaps = 4/161 (2%)

Query: 1   MRPYKNSNNSRRPAAVLHLLCVAAFFSIIVFAIQSSFFAGNRNSDLNKEEIHTLSEFQFS 60
           MR +KN++   R  AVLHL+C+AAF S+ VFAIQSSFF+G+R+ DL KEEI TLS FQFS
Sbjct: 1   MRGHKNTSGVSRRPAVLHLVCIAAFLSLFVFAIQSSFFSGDRSLDLYKEEIRTLSNFQFS 60

Query: 61  VQQCVANRGLGLTAHIVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHYDVCDAILLWEQ 120
           VQQCVANRGLGLTAHI+DHCKLTLKFP GTNSTWYN QFKI+EPLEYHYDVCDAILLWEQ
Sbjct: 61  VQQCVANRGLGLTAHIIDHCKLTLKFPPGTNSTWYNEQFKIFEPLEYHYDVCDAILLWEQ 120

Query: 121 YRNMTTVLTREYLDARPDGWLDYAAKRIAQLYDVCGTFSCY 161
           YRNMTTVLTREYLD RPDGWLDYAAKRIAQL    GT  CY
Sbjct: 121 YRNMTTVLTREYLDTRPDGWLDYAAKRIAQL----GTDKCY 157


>30147.m014429 alpha-2,8-sialyltransferase 8b, putative
          Length = 442

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 79/133 (59%), Gaps = 6/133 (4%)

Query: 19  LLCVAAFFSIIVFAIQSSFFAGNRNS--DLNKEEIHTLSEFQFSVQQCVANRGLGLTA-H 75
           ++ +A+  S I+  I       N NS   L+ E++  L   Q S Q+CV   GLGL A  
Sbjct: 9   VVALASGLSAILIYITG---VSNLNSIHKLSHEDVKALESLQSSFQKCVRANGLGLQAVP 65

Query: 76  IVDHCKLTLKFPEGTNSTWYNAQFKIYEPLEYHYDVCDAILLWEQYRNMTTVLTREYLDA 135
             D+C++T+ FP  T   W + +    E L + +++C+A+  WEQ RN TT+LTRE++DA
Sbjct: 66  GSDYCQVTINFPSDTVPRWKDPKTGELEGLSFEFNLCEAVATWEQVRNSTTILTREFIDA 125

Query: 136 RPDGWLDYAAKRI 148
            P+GW+DYA +RI
Sbjct: 126 LPNGWVDYAWRRI 138