Jatropha Genome Database

JcCB0459051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0459051.10 + phase: 0 
         (178 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007275 conserved hypothetical protein                          226   5e-60
30009.m000824 conserved hypothetical protein                          198   9e-52
30131.m007008 conserved hypothetical protein                           91   3e-19

>30131.m007275 conserved hypothetical protein
          Length = 419

 Score =  226 bits (576), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 121/173 (69%), Positives = 131/173 (75%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGCL STQ+ SGGNG+WPRNVGEVA+FVP +RIPKPVDFTQ LGD +SR L+ERLSALRT
Sbjct: 1   MGCLVSTQKGSGGNGRWPRNVGEVAVFVPAIRIPKPVDFTQQLGDDISRTLVERLSALRT 60

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           RIVVMAGQE            QHGGST+ DLQQALEDYLPVLLGLVENGN+ Q EL FSW
Sbjct: 61  RIVVMAGQEAPSATKPRRTATQHGGSTLADLQQALEDYLPVLLGLVENGNEPQHELHFSW 120

Query: 121 LNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGHLSKLSE 173
           LNQEDT EETTMS  WYE+LSVLH                +TSND HLSKLSE
Sbjct: 121 LNQEDTTEETTMSTTWYEVLSVLHLMAVLSLSQANLLLLPVTSNDDHLSKLSE 173


>30009.m000824 conserved hypothetical protein
          Length = 420

 Score =  198 bits (504), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 98/173 (56%), Positives = 121/173 (69%), Gaps = 1/173 (0%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC+ ST ++SGGN + P ++GEV +++PG RIPK VDF+  LGD LS+NL+ERLSALRT
Sbjct: 1   MGCIVSTPKESGGNRRKPGSIGEVFVYIPGFRIPKAVDFSVSLGDHLSKNLVERLSALRT 60

Query: 61  RIVVMAGQEX-XXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFS 119
           RIVVMAGQE             QHGGST+ DL QALEDYLP+LLGLV++G+ LQ ++QF 
Sbjct: 61  RIVVMAGQEAPTVTRTKRKNATQHGGSTLADLHQALEDYLPILLGLVKDGSHLQHKVQFV 120

Query: 120 WLNQEDTAEETTMSNFWYELLSVLHXXXXXXXXXXXXXXXXITSNDGHLSKLS 172
           W+NQED AEET MSN WYE+LSVLH                 TS DG+  K+S
Sbjct: 121 WINQEDDAEETAMSNAWYEVLSVLHLMAMLLLSQANLLLLPRTSADGYQPKVS 173


>30131.m007008 conserved hypothetical protein
          Length = 416

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 16/144 (11%)

Query: 1   MGCLSSTQRDSGGNGKWPRNVGEVALFVPGMRIPKPVDFTQPLGDGLSRNLIERLSALRT 60
           MGC +S    + G  K    + EV ++ P MR+P   D  + L   + ++L++RL+ LR 
Sbjct: 1   MGCTASIY--AVGRRKKKACIPEVVVYYPSMRVPAQSDLQRALKGLIPQDLVDRLACLRN 58

Query: 61  RIVVMAGQEXXXXXXXXXXXXQHGGSTMLDLQQALEDYLPVLLGLVENGNQLQQELQFSW 120
           +I ++A                  GS + +L++ALE+YL +L+GL +  N L+  ++F W
Sbjct: 59  QITLVA--------------EDTDGSAITELRRALEEYLSLLIGLTKKENGLEDSIEFKW 104

Query: 121 LNQEDTAEETTMSNFWYELLSVLH 144
            N ED   E++++N W+ELLSV+H
Sbjct: 105 KNLEDGQHESSVANSWFELLSVVH 128