Jatropha Genome Database

JcCB0458291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0458291.10 + phase: 1 /partial
         (160 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013741 voltage-dependent anion-selective channel, putative     237   2e-63
29661.m000917 voltage-dependent anion-selective channel, putative     186   5e-48
29822.m003473 voltage-dependent anion-selective channel, putative     149   5e-37
29736.m002034 voltage-dependent anion-selective channel, putative     145   9e-36
30147.m014072 voltage-dependent anion-selective channel, putative      69   9e-13

>30170.m013741 voltage-dependent anion-selective channel, putative
          Length = 275

 Score =  237 bits (604), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 116/154 (75%), Positives = 132/154 (85%), Gaps = 1/154 (0%)

Query: 7   NHTDLIVDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSI 66
           NH+  +VD SATIGTPTIAFGAETSY TA+GEF KYNAGV Y++ D+NASVILADKG+SI
Sbjct: 123 NHSP-VVDVSATIGTPTIAFGAETSYTTATGEFPKYNAGVRYSTADSNASVILADKGDSI 181

Query: 67  KVSYLRHLEMMNQLTVVGEINRTFSNNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQ 126
           +VSYL HL+++N+ T  G I+R FS NENTLTV CSYV DPQTVLK KLNNHG+LGAL+Q
Sbjct: 182 QVSYLHHLDLLNKGTFGGMISRKFSTNENTLTVACSYVVDPQTVLKAKLNNHGNLGALLQ 241

Query: 127 HEFKPKSFLTISGSFDTKALHKNPKFGLALSLKP 160
           HE  PKS LT+SGSFDTK L KNPKFGLALSLKP
Sbjct: 242 HEINPKSLLTLSGSFDTKNLQKNPKFGLALSLKP 275


>29661.m000917 voltage-dependent anion-selective channel, putative
          Length = 276

 Score =  186 bits (472), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 91/148 (61%), Positives = 110/148 (74%)

Query: 13  VDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYLR 72
           VD SATIGTP IAFGAE SY T +G F+KY +G+S T PD+ AS+IL  KG++IK SYL 
Sbjct: 129 VDVSATIGTPAIAFGAEASYDTTTGNFTKYTSGISVTKPDSCASIILGHKGDTIKASYLH 188

Query: 73  HLEMMNQLTVVGEINRTFSNNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQHEFKPK 132
           +L+   +   V EI+R FS NENT+TVG SY  D  TV+K KLNN+G LGAL+QHE  PK
Sbjct: 189 YLDQSKKSAGVAEISRRFSTNENTITVGGSYAVDHLTVVKAKLNNYGKLGALLQHEIIPK 248

Query: 133 SFLTISGSFDTKALHKNPKFGLALSLKP 160
           S +TIS  FDTKAL K+PKFG A +LKP
Sbjct: 249 SMVTISSEFDTKALEKHPKFGFAFALKP 276


>29822.m003473 voltage-dependent anion-selective channel, putative
          Length = 274

 Score =  149 bits (376), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 75/149 (50%), Positives = 104/149 (69%), Gaps = 4/149 (2%)

Query: 13  VDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYLR 72
           V+FS  IGT  ++ G E S+ T SG F+K NAG SY++ D  AS+ L DKG+S+K SY  
Sbjct: 129 VNFSGVIGTNVVSLGTELSFDTKSGNFTKCNAGFSYSNADLIASLTLNDKGDSLKASYY- 187

Query: 73  HLEMMNQLTVVG-EINRTFSNNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQHEFKP 131
             +++N +  VG E++ +FS NENT+T+G  +  DP T +KT++NN G   AL QHE++P
Sbjct: 188 --QIVNPVHAVGAEVSHSFSTNENTITLGSQHALDPLTTMKTRVNNFGKASALFQHEWRP 245

Query: 132 KSFLTISGSFDTKALHKNPKFGLALSLKP 160
           KSF+T+S   DTKA+  NPK GLAL+LKP
Sbjct: 246 KSFITVSAEVDTKAIESNPKIGLALALKP 274


>29736.m002034 voltage-dependent anion-selective channel, putative
          Length = 276

 Score =  145 bits (366), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 101/149 (67%)

Query: 12  IVDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYL 71
           IV+FS  IG+  +A G + S+ TASG F+K NAG+SY++ D  AS+ L DKG+++  SY 
Sbjct: 128 IVNFSGVIGSSAVALGTDLSFDTASGNFTKLNAGLSYSNTDLIASLTLNDKGDTLNASYY 187

Query: 72  RHLEMMNQLTVVGEINRTFSNNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQHEFKP 131
             +  +    V  E+  +FS+NENTLT G  +  DP T +K ++N++G   AL+QHE++P
Sbjct: 188 HIVSPLTNTAVGAELTHSFSSNENTLTFGTQHALDPLTTVKARVNSYGKASALIQHEWRP 247

Query: 132 KSFLTISGSFDTKALHKNPKFGLALSLKP 160
           KS  TISG  DT+A+ K+ K GLAL+LKP
Sbjct: 248 KSLFTISGEVDTRAIEKSAKIGLALALKP 276


>30147.m014072 voltage-dependent anion-selective channel, putative
          Length = 251

 Score = 68.9 bits (167), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%)

Query: 12  IVDFSATIGTPTIAFGAETSYATASGEFSKYNAGVSYTSPDTNASVILADKGNSIKVSYL 71
           +V+ S   G    + G + ++  A G F +++AG+S+ SP   +SV L DK +++K S  
Sbjct: 100 VVNLSGVAGNTLFSLGTDITFNVAQGSFDEFSAGMSFNSPFIISSVNLDDKLDAVKASCY 159

Query: 72  RHLEMMNQLTVVGEINRTFS-NNENTLTVGCSYVADPQTVLKTKLNNHGSLGALVQHEFK 130
                + +  V  E+   FS     T+T G  +   P T++K ++N    LGAL + E  
Sbjct: 160 YSFNHLTRTAVAAELKHNFSTTGRTTITFGAQHSMFPSTLMKARVNTDAKLGALFKLEMW 219

Query: 131 PKSFLTISGSFDTKA 145
            K  +  +G  D  A
Sbjct: 220 EKLLIAFTGEMDFMA 234