Jatropha Genome Database

JcCB0456881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0456881.10 - phase: 0 /partial
         (148 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001442 dihydrodipicolinate synthase, putative                  278   6e-76

>29830.m001442 dihydrodipicolinate synthase, putative
          Length = 367

 Score =  278 bits (711), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 130/148 (87%), Positives = 144/148 (97%)

Query: 1   LAGVKECMGNDRVEQYTEKGIVVWSGNDDECHDARWSHGATGVISVASNLVPGLMRKLMI 60
           LAGVKEC+GNDRVE+YTEKGIVVWSGNDD+CHD+RW+HGATGVISV SNLVPGLMR+L+ 
Sbjct: 220 LAGVKECVGNDRVEEYTEKGIVVWSGNDDQCHDSRWNHGATGVISVTSNLVPGLMRQLVF 279

Query: 61  EGKDPALNSKLLPLIRWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLPKRVEFVNLV 120
           EGK+PALNSKLLPLI WLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPL +RVEFVNLV
Sbjct: 280 EGKNPALNSKLLPLIDWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLAQRVEFVNLV 339

Query: 121 KAIGRENFVGEQDVQVLEDDDFMLVGRY 148
           KAIGRENFVGE+DV+VL+DDDF+L+GRY
Sbjct: 340 KAIGRENFVGEKDVRVLDDDDFILIGRY 367