Jatropha Genome Database

JcCB0455931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0455931.10 - phase: 0 
         (94 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013657 conserved hypothetical protein                          174   7e-45
29813.m001542 conserved hypothetical protein                          102   4e-23
29635.m000460 conserved hypothetical protein                           98   1e-21
30131.m007220 conserved hypothetical protein                           89   3e-19

>30170.m013657 conserved hypothetical protein
          Length = 731

 Score =  174 bits (441), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 85/94 (90%), Positives = 87/94 (92%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          MDI ALLTSAGINI LCI+L SLYSILRKQPSNRVVYFGRRLASVRIRN DFFSI+RFVP
Sbjct: 1  MDIAALLTSAGINIGLCIVLLSLYSILRKQPSNRVVYFGRRLASVRIRNTDFFSIERFVP 60

Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          SPSWI KAWETTEEEILAIGGLDALAFQRML F 
Sbjct: 61 SPSWIVKAWETTEEEILAIGGLDALAFQRMLIFS 94


>29813.m001542 conserved hypothetical protein
          Length = 710

 Score =  102 bits (254), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 63/94 (67%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVRIRNNDFFSIDRFVP 60
          M + ALLTS GIN  LC+L F  YSILRKQPSN  VY  R LA    +    F+++R +P
Sbjct: 1  MLVSALLTSLGINSGLCVLFFVFYSILRKQPSNYEVYAPRLLAEGNSKRRSRFNLERLIP 60

Query: 61 SPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          SP WI KAW+ +EE+IL   GLDA+ F R++TF 
Sbjct: 61 SPGWISKAWKLSEEDILLSSGLDAVVFMRLITFS 94


>29635.m000460 conserved hypothetical protein
          Length = 717

 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 5/98 (5%)

Query: 1  MDIGALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLASVR----IRNNDFFSID 56
          M + ALLTS GIN+ LC L F+LYSIL+KQPSNR VY  R + S +    ++ N+ F ++
Sbjct: 1  MILSALLTSVGINLGLCFLFFTLYSILKKQPSNRYVYAPRLVRSQKSNQQLQGNE-FDLE 59

Query: 57 RFVPSPSWIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          R +PS  W+ +AW+ T++ +++I GLDAL F R+  FG
Sbjct: 60 RLLPSAGWVTRAWQLTDDHLISISGLDALVFARIFYFG 97


>30131.m007220 conserved hypothetical protein
          Length = 715

 Score = 89.4 bits (220), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 1/91 (1%)

Query: 5  ALLTSAGINIALCILLFSLYSILRKQPSNRVVYFGRRLAS-VRIRNNDFFSIDRFVPSPS 63
          +L  SAGIN  L +++ SL+SI RKQPSN ++Y+ RRL+   R+  +  F+  RF+PS S
Sbjct: 5  SLAASAGINFGLALIVLSLFSIFRKQPSNALIYYSRRLSKGHRVPFDHSFTFSRFLPSVS 64

Query: 64 WIWKAWETTEEEILAIGGLDALAFQRMLTFG 94
          WI +A+  TE+EIL   GLDAL   R+  FG
Sbjct: 65 WIPRAFRVTEDEILQTSGLDALLIIRLFKFG 95