Jatropha Genome Database

JcCB0454511.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0454511.10 - phase: 0 /partial
         (165 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m010847 dynamin, putative                                       336   3e-93
29742.m001419 dynamin, putative                                       296   2e-81
29628.m000770 dynamin, putative                                       214   2e-56
29709.m001211 dynamin, putative                                       199   6e-52
27647.m000182 dynamin, putative                                       189   5e-49

>30190.m010847 dynamin, putative
          Length = 610

 Score =  336 bits (862), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 159/165 (96%), Positives = 165/165 (100%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
           ELKQYPALRVEVGNAAI+SL++MKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP
Sbjct: 446 ELKQYPALRVEVGNAAIDSLERMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 505

Query: 61  THSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELG 120
           THSIFDRYNDSYLRRIG+TVLSYVNMVCA+LRNSIPKSIVYCQVREAKRSLLDHFFTELG
Sbjct: 506 THSIFDRYNDSYLRRIGSTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTELG 565

Query: 121 KMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAWSK 165
           KMEQKYLSSLLNEDPAVMERRAAL+KRLELYRSAQAEIDTVAWSK
Sbjct: 566 KMEQKYLSSLLNEDPAVMERRAALSKRLELYRSAQAEIDTVAWSK 610


>29742.m001419 dynamin, putative
          Length = 609

 Score =  296 bits (759), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 137/165 (83%), Positives = 154/165 (93%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
           ELKQYP LRVEV NAAIESLD+M+EES+KATL+LVDMEC YLTV+FFRKLPQD++KGGNP
Sbjct: 445 ELKQYPTLRVEVSNAAIESLDRMREESKKATLQLVDMECCYLTVEFFRKLPQDIEKGGNP 504

Query: 61  THSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELG 120
           THSIFDRYNDSYLRR+G+ VLSYVNMVC +LRNSIPKS+VYCQVR+AKRSLLD+FF ELG
Sbjct: 505 THSIFDRYNDSYLRRVGSNVLSYVNMVCGSLRNSIPKSVVYCQVRDAKRSLLDYFFAELG 564

Query: 121 KMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAWSK 165
           K E K LSSLL+EDPAVM+RR +LAKRLELYRSAQAEID VAW+K
Sbjct: 565 KKETKQLSSLLDEDPAVMQRRISLAKRLELYRSAQAEIDAVAWAK 609


>29628.m000770 dynamin, putative
          Length = 614

 Score =  214 bits (545), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 98/165 (59%), Positives = 133/165 (80%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
           ELK++P L+ E+  AA ++L++ +E+SRK TL+LVDME SYLTVDFFRK+P +++K GNP
Sbjct: 450 ELKRFPTLQAEIAIAASDALERFREDSRKTTLRLVDMESSYLTVDFFRKIPMEMEKVGNP 509

Query: 61  THSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELG 120
             +  DRY + + RRIG+ V SYV MV   LR SIPK++V+CQVREAKRSLLDHF+T++G
Sbjct: 510 IANNADRYTEGHFRRIGSNVSSYVGMVSEALRISIPKAVVHCQVREAKRSLLDHFYTQIG 569

Query: 121 KMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAWSK 165
           + E K L+ LL+EDPA+MERR   AKRLELY+SA+ EID+V+W++
Sbjct: 570 RKEAKQLAQLLDEDPALMERRQECAKRLELYKSARDEIDSVSWAR 614


>29709.m001211 dynamin, putative
          Length = 618

 Score =  199 bits (506), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 97/169 (57%), Positives = 136/169 (80%), Gaps = 4/169 (2%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDKGGNP 60
           ELK++P L+ E+  AA E+L++ +E+S+K  L+LVDME SYLTV+FFR+LPQ+++KGGNP
Sbjct: 450 ELKRFPTLQAEIAAAANEALERFREDSKKTVLRLVDMESSYLTVEFFRRLPQEMEKGGNP 509

Query: 61  ----THSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFF 116
                 S  DRY + + RRIG+ V SY+ MV  TL+N+IPK++VYCQVREAK+SLL++F+
Sbjct: 510 GAGPASSNVDRYTEGHFRRIGSNVSSYIGMVSETLKNTIPKAVVYCQVREAKQSLLNYFY 569

Query: 117 TELGKMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAWSK 165
           T++GK E K L+ LL+EDPA+MERR   AKRLELY+SA+ EID+V+W++
Sbjct: 570 TQIGKREAKQLAQLLDEDPALMERRQQCAKRLELYKSARDEIDSVSWAR 618


>27647.m000182 dynamin, putative
          Length = 622

 Score =  189 bits (480), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 90/178 (50%), Positives = 129/178 (72%), Gaps = 18/178 (10%)

Query: 1   ELKQYPALRVEVGNAAIESLDKMKEESRKATLKLVDMECSYLTVDFFRKLPQDVDK---- 56
           ELK++P L+ ++  AA E+L++ +++SRK  L+LVDME SYLTV+FFRK+  + +K    
Sbjct: 447 ELKRFPTLQSDIAAAANEALERFRDDSRKTVLRLVDMESSYLTVEFFRKIHLEGEKNTNT 506

Query: 57  -----------GGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVR 105
                         P     DR+ D + R+IG+ V +Y+NMVC TLRNSIPK++VYCQVR
Sbjct: 507 NSNSNSNSNSNASGPNA---DRFADYHFRKIGSNVNAYINMVCDTLRNSIPKAVVYCQVR 563

Query: 106 EAKRSLLDHFFTELGKMEQKYLSSLLNEDPAVMERRAALAKRLELYRSAQAEIDTVAW 163
           EAKRSLL+HF+ ++G+ E++ L ++L+EDP +ME+R A+AKRLELY+SA+ EID VAW
Sbjct: 564 EAKRSLLNHFYAQIGRREKERLGAMLDEDPQLMEKRTAIAKRLELYKSARDEIDAVAW 621