Jatropha Genome Database

JcCB0453321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0453321.10 - phase: 0 /partial
         (151 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000793 ATP binding protein, putative                           248   7e-67

>30008.m000793 ATP binding protein, putative
          Length = 937

 Score =  248 bits (634), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 117/143 (81%), Positives = 131/143 (91%), Gaps = 6/143 (4%)

Query: 8   VTEDFIPIISRIKASMAPLGGPKGEVSYAREHESVWFKGKRFAPAVWAGTPGEEQIKQLK 67
           VTEDF+PIISRIKA+ APLGGPKGE+ YAR+H++VWFKGKRFAP+VWAGTPGEEQIKQLK
Sbjct: 575 VTEDFLPIISRIKATTAPLGGPKGEILYARDHDAVWFKGKRFAPSVWAGTPGEEQIKQLK 634

Query: 68  PAVDSKGRKVGEEWFTTIKVEDALMRYHAAIDKAKARVLELLRGLSAELQSRINILIFAS 127
           PA+DSKGRKVGEEWFTTIKVEDAL RYH A +KAKARVLELL+GLSAELQ++I IL+FAS
Sbjct: 635 PAMDSKGRKVGEEWFTTIKVEDALRRYHDASEKAKARVLELLKGLSAELQTKIKILVFAS 694

Query: 128 MLLVIAKALFAHV------RWVF 144
           MLLVIAKALFAHV      +WVF
Sbjct: 695 MLLVIAKALFAHVSEGRRRKWVF 717