Jatropha Genome Database

JcCB0453091.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0453091.20 - phase: 0 /partial
         (61 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29939.m000548 N(2),N(2)-dimethylguanosine tRNA methyltransferase...    95   7e-21

>29939.m000548 N(2),N(2)-dimethylguanosine tRNA methyltransferase,
           putative
          Length = 422

 Score = 94.7 bits (234), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 42/56 (75%), Positives = 52/56 (92%)

Query: 1   MASRGKINSPSLKTMMSTLVKKGYAATRSHIASNAIKTDCPMSMCIRIAKELQGAQ 56
           MASR KINSP +KT+M+TL+++GYAA+RSHIASNAIKTDCPM + IR+AKELQGA+
Sbjct: 365 MASRAKINSPPIKTLMNTLLQEGYAASRSHIASNAIKTDCPMPVFIRLAKELQGAK 420