Jatropha Genome Database

JcCB0452011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0452011.10 + phase: 2 /pseudo/partial
         (256 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013996 S-adenosylmethionine-dependent methyltransferase, ...   308   2e-84

>30170.m013996 S-adenosylmethionine-dependent methyltransferase,
           putative
          Length = 386

 Score =  308 bits (789), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 145/169 (85%), Positives = 155/169 (91%)

Query: 52  DQCSWRRILPVFNNLVVNETCDDVEAEFLNGKYVLPRQSCFYMSDLGQIRNLIPDESDCG 111
           DQC  +  LPVFNNLVVNETCDD+EAEFLN KY+LPR+SCFYMSDLG IRNLIP ES CG
Sbjct: 165 DQCRDQSNLPVFNNLVVNETCDDLEAEFLNRKYILPRESCFYMSDLGLIRNLIPAESGCG 224

Query: 112 FNLIVVDPPWENASASQKLLYPTLPNRYFLSLPIKQLTHTDGALVALWVTNREKLRDFVE 171
           FNLI+VDPPWENASASQKLLYPTLPNRYFLSLPIKQLTHTDGALV LWVTNREKLR FVE
Sbjct: 225 FNLILVDPPWENASASQKLLYPTLPNRYFLSLPIKQLTHTDGALVGLWVTNREKLRSFVE 284

Query: 172 KELFPTWGVNYAASFYWLKVKADGSLITDLDLFHHRPYECLLLGYCRRE 220
           KELFP WGV+YAA F+WLKVKADGSL++DL+LFHHRPYECLLLGYC  E
Sbjct: 285 KELFPAWGVSYAACFHWLKVKADGSLVSDLNLFHHRPYECLLLGYCHPE 333