Jatropha Genome Database

JcCB0450851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0450851.10 + phase: 1 /pseudo/partial
         (155 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000793 ATP binding protein, putative                           202   6e-53

>30008.m000793 ATP binding protein, putative
          Length = 937

 Score =  202 bits (513), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 97/121 (80%), Positives = 107/121 (88%)

Query: 21  REANHIEFCRIKNVLDEILHMHRNLELTEILKSLMDPTWVATGLKIDFETLVNECEWASD 80
           REANH+EFCRIKNVLDEILHMHRN EL EILKSLMDPTWVATGLKIDFETLVNECEWAS 
Sbjct: 455 REANHLEFCRIKNVLDEILHMHRNSELNEILKSLMDPTWVATGLKIDFETLVNECEWASG 514

Query: 81  RICEMIYLEDKIDRKSDSHSVVPSEFFEDMELSWRGRVKRIHIEEEFAEVESAAQALSSA 140
           RICEMI L+ + D+K  S+SV+PS+FFEDME  W+GRVKR+HIE E AEV+ AA ALSSA
Sbjct: 515 RICEMISLDGEHDQKLSSYSVIPSDFFEDMESLWKGRVKRVHIEGECAEVDRAAHALSSA 574

Query: 141 V 141
           V
Sbjct: 575 V 575