Jatropha Genome Database

JcCB0449291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0449291.10 - phase: 2 /TE/pseudo/partial
         (477 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

48288.m000018 conserved hypothetical protein                           72   4e-13
29968.m000641 conserved hypothetical protein                           65   6e-11
30079.m000450 conserved hypothetical protein                           62   4e-10
29703.m001529 conserved hypothetical protein                           62   6e-10
28842.m000954 conserved hypothetical protein                           58   1e-08
29724.m000848 conserved hypothetical protein                           57   2e-08
29597.m000284 conserved hypothetical protein                           55   1e-07
30226.m002032 conserved hypothetical protein                           54   2e-07
35491.m000007 conserved hypothetical protein                           52   5e-07
29989.m000430 conserved hypothetical protein                           51   1e-06
30068.m002537 conserved hypothetical protein                           48   9e-06

>48288.m000018 conserved hypothetical protein
          Length = 220

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 293 NDTSIILIPMKGNPKLVYDLCPSSLCNVVDKIVSKVVANRMKSCLSNVISDCQSAFVPGR 352
           N T+  LIP    P+      P  LCNV  K+++KV+AN +K  +S VIS  QS+ V GR
Sbjct: 88  NCTNTFLIPKMDAPESSNHFRPIILCNVTYKLITKVIANHLKIIMSKVISPMQSSIVKGR 147

Query: 353 AIMDTVMIAYEIMYHLKRKTQGRVREVALKTDMSKAYDHVEXLFLQNML 401
            IM+ ++I  EI+ HL  K   +   + +K D+ KAYD +   F+ + L
Sbjct: 148 HIMNNIIIVKEIL-HLTNKMTSKTGYMVIKVDLEKAYDKLNWSFILDTL 195


>29968.m000641 conserved hypothetical protein
          Length = 216

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 22/162 (13%)

Query: 51  RSRCHESXRLLETLRSKSALPLVAAGDFNELLDMSEKRGVYGHPLWLIRNFXTVIDKCEL 110
           R+R  ++  LL +L S +  P +  GDFN++L+  EKRG    P WL+  F   +    L
Sbjct: 10  RNRRKDNWDLLRSLASINDSPWIVMGDFNDILNHREKRGGVAQPNWLVEGFRRAVWDSGL 69

Query: 111 LDLGYVG-------------------GYILGNE---VXYSXVGVXNLETTASDHIPVFVN 148
           +DLG+ G                     +LGN      +    V +L++  SDH P+ ++
Sbjct: 70  VDLGFQGCPFTWERGRESGLWVQERLNRMLGNGDWVARHKDARVVHLDSVVSDHFPIILH 129

Query: 149 LGINIIRYARKAFWFENSWLKEVDVEEVVRKGWSKGDGRPLQ 190
           L       + K F FEN W    + EEVVR  W+K  G  +Q
Sbjct: 130 LYRVEGTRSSKRFRFENLWTNYGESEEVVRDSWNKEVGVSIQ 171


>30079.m000450 conserved hypothetical protein
          Length = 331

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%)

Query: 11  MWKERPMVSLFSSSQSHIDVKVTVXSIPQFHFVGFYRQPNRSRCHESXRLLETLRSKSAL 70
           +WKE+ M  L S S +HID  V + ++  +H   FY  P R+R  +S  LL  L + S  
Sbjct: 243 LWKEKNMAKLLSFSSNHIDASVLIPNMKAWHLTYFYGFPKRARRKDSWDLLHKLNTVSTF 302

Query: 71  PLVAAGDFNELLDMSEKRGVYGHP 94
           P     DFN+L+   EK+G   HP
Sbjct: 303 PWCVIEDFNDLMGQHEKKGRLRHP 326


>29703.m001529 conserved hypothetical protein
          Length = 171

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%)

Query: 404 LGFCMDWXXXXXXXXXXXXYHILHDGQCYGPIIPSRDLRHGDPILPYLFIICVXALSSLL 463
           +GF   W            Y +LHD +  GPIIP + L+   P+ PYL I+C   LS++ 
Sbjct: 1   MGFEKRWIKLVMLCVSTVRYSVLHDQEVLGPIIPQKGLKQECPLSPYLSILCAEGLSAMF 60

Query: 464 VKFESAGLFHGCKV 477
            K +  GL +GCKV
Sbjct: 61  RKLDEMGLLYGCKV 74


>28842.m000954 conserved hypothetical protein
          Length = 172

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 4   HGGGLALMWKERPMVSLFSSSQSHIDVKVTVXS-IPQFHFVGFYRQPNRSRCHESXRLLE 62
           H GG ALMWK+   V+L S S  HID++V   + +  +HF   Y  P      ++  +L 
Sbjct: 68  HRGGHALMWKDEVEVTLKSFSLHHIDIEVNFPNDVSSWHFNRIYGWPKGHLRWKTWDILR 127

Query: 63  TLRSKSALPLVAAGDFNELLDMSEKRGVYGHPLWLIRNFXTVID 106
            L S S+LP +  GD NE+L   EK G      + I+NF   +D
Sbjct: 128 HLHSFSSLPCIVGGDLNEILYQDEKLGGNIRDFFKIQNFRDALD 171


>29724.m000848 conserved hypothetical protein
          Length = 145

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 76  GDFNELLDMSEKRGVYGHPLWLIRNFXTVIDKCELLDLGY-VGGYILGNEVXYSXVGVXN 134
           GD+NELL+  +KRG    P W++R F  V+    L DL      Y    +   S     N
Sbjct: 2   GDYNELLNEEDKRGHVPIPAWMLRGFKDVVLDVGLCDLPVNRHQYTWNRDTRLS-----N 56

Query: 135 LETTASDHIPVFVNLGINIIRYARKAFWFENSWLKEVDVEEVVRKGWSKGDGRPLQD 191
           L    SDH P+ + +   +    R+ F FEN WL E +++ VV   W   +  PL D
Sbjct: 57  LIAATSDHSPIELVIVQVLPHGHRRVFKFENGWLHEPELKTVVLNSWGINEASPLLD 113


>29597.m000284 conserved hypothetical protein
          Length = 276

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%)

Query: 2   IGHGGGLALMWKERPMVSLFSSSQSHIDVKVTVXSIPQFHFVGFYRQPNRSRCHESXRLL 61
           + + GGLA+ WK+R +  L + S++ ID++++    P +HF  FY    RSR      L 
Sbjct: 60  VNNEGGLAMFWKDRAVAHLVNFSKNFIDIELSFKDSPSWHFTSFYGCLERSRSLFLWNLP 119

Query: 62  ETLRSKSALPLVAAGDFNEL 81
           + L++ S+LP     DFN+L
Sbjct: 120 KNLQNYSSLPWFCISDFNDL 139


>30226.m002032 conserved hypothetical protein
          Length = 216

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 2   IGHGGGLALMWKERPMVSLFSSSQSHIDVKVTVXSIPQFHFVGFYRQPNRSRCHESXRLL 61
           IG  GGL L+W     VS+ S S  HID  V       +HF GFY   N    H S  L+
Sbjct: 61  IGASGGLILIWHNSVKVSVKSFSPGHIDALVCFDESDVWHFTGFYGNLNSFLRHFSWDLI 120

Query: 62  ETLRSK---SALPLVAAGDFNELLDMSEKRGVY 91
             L S    S LP +  GDFNE+L  SEK G +
Sbjct: 121 RRLGSMAEFSNLPWLMGGDFNEILMQSEKLGGW 153


>35491.m000007 conserved hypothetical protein
          Length = 63

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 41/61 (67%)

Query: 314 PSSLCNVVDKIVSKVVANRMKSCLSNVISDCQSAFVPGRAIMDTVMIAYEIMYHLKRKTQ 373
           P SLC V  KI+ K++  R++  + ++I + QSAF+ GR I D +++ +E+++++K +  
Sbjct: 1   PISLCTVYYKIIIKILVRRLQYVMPHLIKENQSAFITGRLIADKILVPHEVVHYIKSRKL 60

Query: 374 G 374
           G
Sbjct: 61  G 61


>29989.m000430 conserved hypothetical protein
          Length = 123

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 47/95 (49%)

Query: 20  LFSSSQSHIDVKVTVXSIPQFHFVGFYRQPNRSRCHESXRLLETLRSKSALPLVAAGDFN 79
           + S S++ IDV+V + +   +   G        R H++  +L  L SKS LP    GDF 
Sbjct: 9   IVSFSRNFIDVEVQLDNHSLWRLTGVCGVLEHIRRHQAWNMLIQLASKSTLPRCCIGDFT 68

Query: 80  ELLDMSEKRGVYGHPLWLIRNFXTVIDKCELLDLG 114
           ++L   EK+G   H  WL+R F   I  C L  LG
Sbjct: 69  DILFSHEKKGRVPHSNWLLRGFHDTISVCGLYGLG 103


>30068.m002537 conserved hypothetical protein
          Length = 668

 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 33/53 (62%)

Query: 134 NLETTASDHIPVFVNLGINIIRYARKAFWFENSWLKEVDVEEVVRKGWSKGDG 186
           +L+TT+SDH+P++++L   I       F FEN WL E D  EVV + W + +G
Sbjct: 9   SLDTTSSDHLPLYLDLKRKIFVPKSMRFRFENVWLHERDCREVVSRSWEQHEG 61