Jatropha Genome Database

JcCB0449231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0449231.10 + phase: 1 /partial
         (156 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29657.m000468 biotin synthase, putative                               234   8e-63

>29657.m000468 biotin synthase, putative
          Length = 375

 Score =  234 bits (598), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 117/158 (74%), Positives = 131/158 (82%), Gaps = 10/158 (6%)

Query: 9   QELTMNACKP--LNMSEKQE-------LMSVQPTHPESVPINALVSVKGTPLQDQKPVEI 59
           +E+ +N C    + + E +E        +S  P HPESVPINAL++VKGTPL+DQKPVEI
Sbjct: 218 REVGINVCSGGIIGLGEAEEDRVGLLHTLSTLPMHPESVPINALIAVKGTPLEDQKPVEI 277

Query: 60  WEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDV 119
           WEMIRMIATARI+MPKAMVRLSAGRVRFS+ EQALCFL+GANSIFTGEKLLTTPNNDFD 
Sbjct: 278 WEMIRMIATARIIMPKAMVRLSAGRVRFSIAEQALCFLSGANSIFTGEKLLTTPNNDFDA 337

Query: 120 DQQMFKVLGLIPKAPSFSEDEEIAFESENCQ-AVSSSG 156
           DQ MFK+LGLIPKAPSF EDEE A ESENCQ AVSSSG
Sbjct: 338 DQLMFKLLGLIPKAPSFPEDEERALESENCQEAVSSSG 375