Jatropha Genome Database
- JcCB0445261.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0445261.10 + phase: 0 /partial
(215 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29822.m003360 Cyclic nucleotide-gated ion channel, putative 353 4e-98
30147.m013975 Cyclic nucleotide-gated ion channel, putative 229 8e-61
28863.m000089 Cyclic nucleotide-gated ion channel, putative 229 9e-61
29848.m004476 Cyclic nucleotide-gated ion channel, putative 222 1e-58
30169.m006518 Cyclic nucleotide-gated ion channel, putative 170 5e-43
30131.m006865 Cyclic nucleotide-gated ion channel, putative 163 5e-41
29687.m000571 Cyclic nucleotide-gated ion channel, putative 159 8e-40
30078.m002324 Cyclic nucleotide-gated ion channel, putative 153 5e-38
30051.m000527 Cyclic nucleotide-gated ion channel, putative 132 2e-31
27538.m000318 Cyclic nucleotide-gated ion channel, putative 122 1e-28
28124.m000232 Cyclic nucleotide-gated ion channel, putative 100 8e-22
30027.m000817 Cyclic nucleotide-gated ion channel, putative 86 1e-17
>29822.m003360 Cyclic nucleotide-gated ion channel, putative
Length = 654
Score = 353 bits (906), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 173/216 (80%), Positives = 191/216 (88%), Gaps = 1/216 (0%)
Query: 1 MNRLIQNPKSQFRHLRRLHQQLTS-QSLSVTNSVSEVHPLLILWRYQILDPDSDIVTYWN 59
MNR I NP S+ RH RRLH LTS S S+S+ +PL ILW YQILDPDSDIVTYWN
Sbjct: 1 MNRFIPNPNSKLRHFRRLHHHLTSPSLASSATSLSDANPLHILWHYQILDPDSDIVTYWN 60
Query: 60 YVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSISDLFFVLHIIMKFR 119
YVFLITSI+ALF+DPLFFFLPYA+ DG+CL+ND LA+LITYFRS +DLFF+LHIIMKFR
Sbjct: 61 YVFLITSIVALFVDPLFFFLPYADADGVCLTNDASLAVLITYFRSFADLFFLLHIIMKFR 120
Query: 120 TAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTVIWVVIPATRDSRAD 179
TAFVAPNSRVFGRGELVMDAKEIA RYL+SDFVIDLAAALPLPQ VIWVVIPA R+ RAD
Sbjct: 121 TAFVAPNSRVFGRGELVMDAKEIARRYLRSDFVIDLAAALPLPQVVIWVVIPAARNGRAD 180
Query: 180 HANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFVA 215
HANNTLSL+VLIQYIPR+FVIFPLHQRIVK+TGF+A
Sbjct: 181 HANNTLSLIVLIQYIPRLFVIFPLHQRIVKSTGFIA 216
>30147.m013975 Cyclic nucleotide-gated ion channel, putative
Length = 680
Score = 229 bits (584), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 140/175 (80%), Gaps = 1/175 (0%)
Query: 41 ILWRYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILIT 100
+ W QILDP SD V WN++FL+T +IALF+DPL+F+LP D C+ D L I +T
Sbjct: 25 VSWWNQILDPGSDFVNKWNHIFLVTCMIALFLDPLYFYLPIIGGDA-CMDIDITLGIWVT 83
Query: 101 YFRSISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALP 160
+ R+++DLFF +H+++KFRTAFVAP+SRVFGRGELVMD K IA+RYLKS F +DL AALP
Sbjct: 84 FARTVTDLFFFMHVVIKFRTAFVAPSSRVFGRGELVMDPKAIAVRYLKSQFAVDLFAALP 143
Query: 161 LPQTVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFVA 215
LPQT+IW VIPA + A+HAN+T+SL+VLIQYIPR FV+ PL++RIVK+TG V+
Sbjct: 144 LPQTIIWFVIPAVKAPTANHANHTVSLIVLIQYIPRFFVMLPLNRRIVKSTGVVS 198
>28863.m000089 Cyclic nucleotide-gated ion channel, putative
Length = 396
Score = 229 bits (583), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 137/174 (78%), Gaps = 2/174 (1%)
Query: 43 WRYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPY--ANFDGLCLSNDNHLAILIT 100
W ++ILDP SDIV WN +FL++ ++ALF+DPL+F+LP N C++ D L I+ T
Sbjct: 75 WHHKILDPGSDIVLRWNRIFLVSCLLALFVDPLYFYLPTVGGNAASSCVNTDFKLRIVAT 134
Query: 101 YFRSISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALP 160
+FR+I+DLF++LH+++KFRTA+VAPN+RVFGRGELVMD K+IA RY+KSDF IDL A LP
Sbjct: 135 FFRTIADLFYLLHMVIKFRTAYVAPNTRVFGRGELVMDPKKIAQRYMKSDFCIDLIATLP 194
Query: 161 LPQTVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
LPQ VIW +IPA R + DH NN L+L+VL+QYIPR+++IFPL I+K TG V
Sbjct: 195 LPQIVIWFIIPAARGRQTDHKNNALALIVLLQYIPRLYLIFPLSSEIIKATGVV 248
>29848.m004476 Cyclic nucleotide-gated ion channel, putative
Length = 629
Score = 222 bits (565), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 134/174 (77%), Gaps = 2/174 (1%)
Query: 43 WRYQILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGL--CLSNDNHLAILIT 100
WR +ILDP +D+ WN VFL + ++ALF+DPLFF+LP G+ C+ D +L I +T
Sbjct: 62 WRKRILDPGTDVYLQWNRVFLFSCLVALFVDPLFFYLPSVANRGVTSCMDTDLNLGITVT 121
Query: 101 YFRSISDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALP 160
FR+ +D+F++LH+++KFRTA+VAP+SRVFGRGELV+D K+I+ RY KSDF IDL AALP
Sbjct: 122 CFRTFADIFYILHLVVKFRTAYVAPSSRVFGRGELVVDPKKISWRYFKSDFFIDLIAALP 181
Query: 161 LPQTVIWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
LPQ VIW +IPA R S +DH NN L L+VL+QYIPR+++IFPL I+K TG V
Sbjct: 182 LPQIVIWFIIPAIRGSHSDHTNNALVLIVLLQYIPRLYLIFPLSSEIIKATGVV 235
>30169.m006518 Cyclic nucleotide-gated ion channel, putative
Length = 838
Score = 170 bits (430), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 131/206 (63%), Gaps = 10/206 (4%)
Query: 9 KSQFRHLRRLHQQLTSQSL--SVTNSVSEVHPLLILWRYQILDPDSDIVTYWNYVFLITS 66
+S ++R+ + L S S +VT ++ + +ILDP + WN +F+++
Sbjct: 51 ESGSERIKRIRKSLKSYSFGSAVTKGLNSGN--------KILDPQGPFLQRWNKIFVLSC 102
Query: 67 IIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSISDLFFVLHIIMKFRTAFVAPN 126
+IA+ +DPLFF++P N CL D+ + I+ + R +D+F+++HII +FRT F+AP+
Sbjct: 103 LIAVSLDPLFFYVPVINDIEKCLGLDSRMEIVASVLRWFTDIFYIIHIIFQFRTGFIAPS 162
Query: 127 SRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTVIWVVIPATRDSRADHANNTLS 186
SRVFGRG LV D EIA RYL S F+ID+ A LPLPQ VI ++IP + SR+ + N L
Sbjct: 163 SRVFGRGVLVEDTWEIAKRYLSSYFLIDILAVLPLPQVVILIIIPKMKGSRSLNTKNLLK 222
Query: 187 LMVLIQYIPRMFVIFPLHQRIVKTTG 212
+VL QYIPR I+PL++ + +T+G
Sbjct: 223 FVVLFQYIPRFMRIYPLYKEVTRTSG 248
>30131.m006865 Cyclic nucleotide-gated ion channel, putative
Length = 1005
Score = 163 bits (413), Expect = 5e-41, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 129/217 (59%), Gaps = 4/217 (1%)
Query: 3 RLIQNPKSQFRH-LRRLHQQLTSQSLSVTNSVSE-VHPL-LILWRYQILDPDSDIVTYWN 59
R +NP FR +++ + L + + VS V P L + I DP + WN
Sbjct: 52 RRKRNPSQSFRFGMKKGSEGLITFGRHLKTGVSRAVFPEDLKVSEKMIFDPQDKSLLLWN 111
Query: 60 YVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSISDLFFVLHIIMKFR 119
+F+I+ I+A+ +DPLFF+LP N+ +CL D +LA IT R++ D F++L + ++FR
Sbjct: 112 RLFVISCILAVSVDPLFFYLPVFNYKMVCLGMDTNLAATITAVRTMLDAFYLLRMTLQFR 171
Query: 120 TAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTVIWVVIPATRD-SRA 178
TA+VAP+SRVFGRGELV+D+ +IA RYL+ F++D A LPLPQ V+W + T+ S
Sbjct: 172 TAYVAPSSRVFGRGELVIDSGQIAARYLRHYFIVDFLAVLPLPQMVVWKYLTETKKGSEV 231
Query: 179 DHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFVA 215
L ++V +QYIPR F PL + KT G A
Sbjct: 232 LATKQALLIIVFLQYIPRFFRFIPLTSDLKKTAGAFA 268
>29687.m000571 Cyclic nucleotide-gated ion channel, putative
Length = 735
Score = 159 bits (403), Expect = 8e-40, Method: Composition-based stats.
Identities = 74/170 (43%), Positives = 107/170 (62%)
Query: 46 QILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSI 105
+I DP + N +F+I+ I+ + +DPLFF+LP N CL D LAI+ T R++
Sbjct: 99 KIFDPQDKFLLLCNRLFVISCILGVSVDPLFFYLPVFNDPAHCLGIDRKLAIIATTLRTV 158
Query: 106 SDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTV 165
D F+++ + ++FRTA++AP+SRVFGRGELV+D +IA RYL+ F+ID + LPLPQ V
Sbjct: 159 IDAFYLIRMALQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLRQYFIIDFLSVLPLPQIV 218
Query: 166 IWVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFVA 215
+W + + S L +VL+QYIPR IFPL + +TTG A
Sbjct: 219 VWRFLQRSNGSDVLATKQALLFIVLLQYIPRFLRIFPLFSEMKRTTGVFA 268
>30078.m002324 Cyclic nucleotide-gated ion channel, putative
Length = 347
Score = 153 bits (387), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 108/168 (64%), Gaps = 1/168 (0%)
Query: 47 ILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSIS 106
ILDP ++ WN +F + +LFIDPLFF LP D +C+ L T RS++
Sbjct: 63 ILDPRGPLIQTWNEIFFAACLTSLFIDPLFFLLPQVKED-ICIHVSIPLEAAFTVIRSLA 121
Query: 107 DLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTVI 166
DL +++HI ++FR A+VAP+SRVFGRGELV++ +IA RYL DF +D+ ALP+PQ +I
Sbjct: 122 DLVYIIHISVRFRMAYVAPSSRVFGRGELVVNPSKIASRYLHRDFWLDILVALPVPQLLI 181
Query: 167 WVVIPATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
W VIP+ H + + ++IQY+ R+++IFPL +I K TG V
Sbjct: 182 WGVIPSLSGPSMAHTRTVIRISIIIQYLLRLYLIFPLSSQINKATGLV 229
>30051.m000527 Cyclic nucleotide-gated ion channel, putative
Length = 778
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Query: 47 ILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSIS 106
+++P + +V WN +I ++A+F+DPLFFF+ + C+ + L I FRS++
Sbjct: 197 VMNPHTKVVQQWNKFCVICCLVAIFVDPLFFFMLSVQQENKCIVINWPLTTTIIVFRSMT 256
Query: 107 DLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTVI 166
D ++L+I+++FR A++AP SRV G GELV K+IAM YL F++DL LPLPQ +I
Sbjct: 257 DFIYLLNILLQFRLAYIAPESRVVGAGELVDHPKKIAMNYLCGYFLVDLFIMLPLPQIII 316
Query: 167 WVVIP-ATRDSRADHANNTLSLMVLIQYIPRMFVIFPL 203
+V+P S A++A N L VL+QY+PR++ PL
Sbjct: 317 LLVLPNGLGSSGANYAKNLLQAAVLVQYVPRLYRFLPL 354
>27538.m000318 Cyclic nucleotide-gated ion channel, putative
Length = 518
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 78/104 (75%)
Query: 111 VLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKSDFVIDLAAALPLPQTVIWVVI 170
++ I ++FRTA+VAP+SRVFGRGELV+D+K+IA++YL++ F IDL AALPLPQ +IW VI
Sbjct: 1 MIQIFIRFRTAYVAPSSRVFGRGELVIDSKKIAVKYLQTHFWIDLVAALPLPQVLIWFVI 60
Query: 171 PATRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
P S + N L +++ QY+PR+F+I PL RI+K G V
Sbjct: 61 PNLAGSTMTNTKNVLRFIIIFQYLPRLFLILPLSSRIIKANGVV 104
>28124.m000232 Cyclic nucleotide-gated ion channel, putative
Length = 715
Score = 99.8 bits (247), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Query: 47 ILDPDSDIVTYWNYVFLITSIIALFIDPLFFF-LPYANFDGLCLSNDNHLAILITYFRSI 105
+LDP S V WN FL+ +AL IDPLFF+ L CL D LA ++T R+
Sbjct: 111 VLDPRSKRVQKWNRAFLLARGMALAIDPLFFYSLSIGRGGAPCLYMDGGLAAIVTVLRTC 170
Query: 106 SDLFFVLHIIMKFRTAFVAPNSRVFGRGELVMDAKEIAMRYLKS--DFVIDLAAALPLPQ 163
D + H+ ++FR A+V+ S V G G+LV DA+ IA Y++S F D LP+PQ
Sbjct: 171 VDAIHLCHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQ 230
Query: 164 TVIWVVIPA-TRDSRADHANNTLSLMVLIQYIPRMFVIFPLHQRIVKTTGFV 214
V W+++P R+ + L L+ L Q++P+++ L +++ K TG++
Sbjct: 231 AVFWLILPKLIREEQIKLIMTILLLIFLFQFLPKVYHCIYLMRKMQKVTGYI 282
>30027.m000817 Cyclic nucleotide-gated ion channel, putative
Length = 687
Score = 85.9 bits (211), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 46 QILDPDSDIVTYWNYVFLITSIIALFIDPLFFFLPYANFDGLCLSNDNHLAILITYFRSI 105
Q+LDP + V WN FL+ LF+DPLFF+ + +CL D A+ +T R +
Sbjct: 70 QVLDPRAKWVQEWNRGFLLVCATGLFVDPLFFYALSVSDTCMCLFIDGWFALTVTALRCM 129
Query: 106 SDLFFVLHIIMKFRTA------FVAPNSRVFGRGELVMDAKEIAMRYLKSD--FVIDLAA 157
+D V ++ ++ + A G +A+RYLK+ F DL
Sbjct: 130 TDALHVWNMWLQLKMAKKPSIGGGIGGDYGDRSGPRFSSPSSVALRYLKAKKGFFFDLFV 189
Query: 158 ALPLPQTVIWVVIPATRDSRADHANNTLSLMV-LIQYIPRMFVIFPLHQRIVKTTGFV 214
LPLPQ ++WV IP+ + + T+ L++ L QY+P+++ L +R+ +G++
Sbjct: 190 ILPLPQIILWVAIPSLLEGGSVTVVMTIFLIIFLFQYLPKIYHSVCLLRRMQNLSGYI 247