Jatropha Genome Database

JcCB0437881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0437881.10 - phase: 0 /TE
         (583 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29930.m000615 conserved hypothetical protein                           82   5e-16

>29930.m000615 conserved hypothetical protein
          Length = 97

 Score = 82.4 bits (202), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 66/97 (68%)

Query: 451 MEAVLPIELEVQSARIIRESQISEADWAKNYHLQLLGMDEKRLQAIHQTQVYQRRMARHF 510
           MEA+L +E+E+ S R++ E++I+EA W ++ + QL  +DE   +A++ T +YQ+R AR  
Sbjct: 1   MEAILLVEVEINSLRVLIEAEIAEAKWGRDRYEQLKLIDETMTRAMYHTLLYQQRTARVS 60

Query: 511 NKKVKDRKLEEGCLVLKEIRQPIIDPRGKFRPHWAGP 547
           +K VK R L++G LVLKE +   +D  GK RP+  GP
Sbjct: 61  DKHVKPRPLKKGNLVLKEGKLVDLDHLGKLRPNSEGP 97