Jatropha Genome Database

JcCB0432281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0432281.10 - phase: 0 /pseudo
         (149 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008622 fkbp-type peptidyl-prolyl cis-trans isomerase 2, c...   193   3e-50

>30128.m008622 fkbp-type peptidyl-prolyl cis-trans isomerase 2,
           chloroplast, putative
          Length = 166

 Score =  193 bits (490), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 90/118 (76%), Positives = 108/118 (91%), Gaps = 2/118 (1%)

Query: 15  FPRRVLLKSIGFNSILLRVS--PVFAAPVPDMKEPQVVRTLKLDSGVRIQEIIEGEGSEA 72
            PRRV+LK IG N++LL +S  PV AAP+P M+EP+++RTLK D+GVRI+EI++G+G EA
Sbjct: 1   MPRRVILKCIGLNTVLLCISNNPVLAAPMPGMEEPEIIRTLKFDNGVRIREIVDGKGQEA 60

Query: 73  HEGDVVEINYVCRRSNGYFVHSTVDQFSGESSPVILPLDENRIIKGLKDVLIGMKIGG 130
           HEGDVVE+NYVCRRSNGYFVHSTVDQFSGESSPVILPLDENRIIKGLK+V+IGMK+GG
Sbjct: 61  HEGDVVEVNYVCRRSNGYFVHSTVDQFSGESSPVILPLDENRIIKGLKEVIIGMKVGG 118