Jatropha Genome Database

JcCB0432121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0432121.10 - phase: 2 /partial
         (185 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30101.m000378 phosphatidylserine decarboxylase, putative              261   1e-70
29765.m000738 phosphatidylserine decarboxylase, putative               57   6e-09

>30101.m000378 phosphatidylserine decarboxylase, putative
          Length = 420

 Score =  261 bits (668), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 132/185 (71%), Positives = 145/185 (78%), Gaps = 29/185 (15%)

Query: 1   IDCSPKKGLYYCVIYLRPGDYHRIHSPVEWNVLVRRHFTGWVGNLFPMNERATRTIRNLY 60
           +   P KGLYYCVIYLRPGDYHRIHSPV+WNVLVRRHF    G+LFPMNERATRTIRNLY
Sbjct: 265 VPACPTKGLYYCVIYLRPGDYHRIHSPVQWNVLVRRHF---AGHLFPMNERATRTIRNLY 321

Query: 61  VENERVVLEGLWQEGFMAIAAIGATNIGSIELFIEPELCTNLPRKKLLNSQPPEERVYEP 120
            ENER                          LFIEPEL TNLPRKKLLN++PPEERVY+P
Sbjct: 322 TENER--------------------------LFIEPELRTNLPRKKLLNTEPPEERVYDP 355

Query: 121 EGIGKMLKKGEEVAAFNMGSTVVLVFQAPTLKLLKNRDSSSEFRFNIKRGDRVRVGEALG 180
           EGIGK+LKKG+EVAAFNMGSTVVLVFQAPTLK +K+   SS+FRFNI+RGDRVRVGEALG
Sbjct: 356 EGIGKVLKKGDEVAAFNMGSTVVLVFQAPTLKPVKDGVPSSDFRFNIRRGDRVRVGEALG 415

Query: 181 RWHDM 185
           RWHD+
Sbjct: 416 RWHDL 420


>29765.m000738 phosphatidylserine decarboxylase, putative
          Length = 633

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 33/142 (23%)

Query: 13  VIYLRPGDYHRIHSPVEWNVLVRRHFTGWVGNLFPMNERATRT-IRNLYVENERVV-LEG 70
           +  L P DYHR H+PV   +     F    G+L+ +N  A  +   N++ EN+RVV +  
Sbjct: 471 IFRLAPQDYHRFHTPVSGTI---EQFVDVPGHLYTVNPIAVNSEYCNVFTENKRVVSIIS 527

Query: 71  LWQEGFMAIAAIGATNIGSIELFIEPELCTNLPRKKLLNSQPPEERVYEPEGIGKMLKKG 130
             + G +A  AIGAT +GSI  F++ E                          G  +KKG
Sbjct: 528 TAEFGKVAFIAIGATMVGSI-TFLKKE--------------------------GDYIKKG 560

Query: 131 EEVAAFNM-GSTVVLVFQAPTL 151
           +E+  F+  GSTV+ VF+   L
Sbjct: 561 DELGYFSFGGSTVICVFEKEDL 582