Jatropha Genome Database

JcCB0431651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0431651.10 - phase: 0 /partial
         (341 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005464 conserved hypothetical protein                          610   e-175
30174.m008793 conserved hypothetical protein                          472   e-133

>29912.m005464 conserved hypothetical protein
          Length = 337

 Score =  610 bits (1573), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 299/327 (91%), Positives = 313/327 (95%)

Query: 12  MAPVEDGTARFLDLLNKIRNGEHKLQDSFVYLLIPGLFSNHGPLYFVGTKRCFSKMGLAC 71
           MAPVEDGTARFL+LL KIRNGEH L +SFVYLLIPGLFSNHGPLYFVGTKR FSKMGLAC
Sbjct: 1   MAPVEDGTARFLELLGKIRNGEHVLPNSFVYLLIPGLFSNHGPLYFVGTKRFFSKMGLAC 60

Query: 72  HIAKIHSEASVEHNACELKHYIEELYWGSGKRVMLLGHSKGGVDAAAALSLYWSDLKDKV 131
           HIAKIHSEASVEHNA ELKHYIEELYWGSGKRVMLLGHSKGG+DAAAALSLYWSDLK KV
Sbjct: 61  HIAKIHSEASVEHNARELKHYIEELYWGSGKRVMLLGHSKGGIDAAAALSLYWSDLKYKV 120

Query: 132 AGLALVQSPYGGSPVASDILREGQIADKETRKIMELLICKFIKGDIRALEDLTYDKRREF 191
           AGLALVQSP+GGSP+ASDILREGQIADKETRKIMELLICK IKGDIRALEDLTYDKRREF
Sbjct: 121 AGLALVQSPFGGSPIASDILREGQIADKETRKIMELLICKLIKGDIRALEDLTYDKRREF 180

Query: 192 IMNHKLPEQIPLISFHSEASIAPGVIATMTQIAHAELPWLPLPKLGFEEPDSVVQAGRKV 251
           IM HKLP+QIPLISFHSEASIAPGV+ATMTQIAHAELPWLPLPKLG EEPD V+QAG +V
Sbjct: 181 IMKHKLPDQIPLISFHSEASIAPGVLATMTQIAHAELPWLPLPKLGVEEPDGVLQAGCQV 240

Query: 252 PVVIPLSAAMAVSALHLQLRYGEKSDGLVTCRDAEVPGSVVVRPDRKLDHAWMVYSSGKK 311
           PV+IPLSAAMAV+ALHLQLRYGEKSDGLVT RDAEVPGSVVVRPDRKLDHAWMVYSSGKK
Sbjct: 241 PVIIPLSAAMAVAALHLQLRYGEKSDGLVTRRDAEVPGSVVVRPDRKLDHAWMVYSSGKK 300

Query: 312 DPNEPDCSEMCEALLTMLVELGMIKEE 338
           +PNEPDC++MCEALLTMLVEL  IKEE
Sbjct: 301 NPNEPDCNQMCEALLTMLVELCKIKEE 327


>30174.m008793 conserved hypothetical protein
          Length = 480

 Score =  472 bits (1214), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 225/337 (66%), Positives = 272/337 (80%), Gaps = 15/337 (4%)

Query: 1   DDIGWVQRTPRMAPVEDGTARFLDLLNKIRNGEHKLQDSFVYLLIPGLFSNHGPLYFVGT 60
           DDIGW++R  ++  VEDGT RF+++L+ IR+G HKL +S VYLL+PGLFSNHGPLYFV T
Sbjct: 149 DDIGWMERASQLPSVEDGTERFMEILDNIRHGLHKLPNSVVYLLVPGLFSNHGPLYFVDT 208

Query: 61  KRCFSKMGLACHIAKIHSEASVEHNACELKHYIEELYWGSGKRVMLLGHSKGGVDAAAAL 120
           K  FSKMGL CHIAKIHSEASVE NA E+K YIEE+YWGS KRVMLLGHSKGG+DAAAAL
Sbjct: 209 KVRFSKMGLTCHIAKIHSEASVEKNAREIKEYIEEIYWGSNKRVMLLGHSKGGIDAAAAL 268

Query: 121 SLYWSDLKDKVAGLALVQSPYGGSPVASDILREGQIADK-ETRKIMELLICKFIKGDIRA 179
           SLYWSDL DKVAGLAL QSPYGG+P+ASDILREGQ+ D    RK+ME++ICK IKGDI+A
Sbjct: 269 SLYWSDLNDKVAGLALAQSPYGGTPIASDILREGQLGDYVNVRKLMEIIICKVIKGDIQA 328

Query: 180 LEDLTYDKRREFIMNHKLPEQIPLISFHSEASIAPGVIATMTQIAHAELPWLPLPKLGFE 239
           LEDLTY++R+EF+  H+LP ++P++SFH+EA I P V+AT++ +AHAELP +  P     
Sbjct: 329 LEDLTYERRKEFLSKHQLPRELPVVSFHTEAGITPAVLATLSHVAHAELPLVGEPA---- 384

Query: 240 EPDSVVQAGRKVPVVIPLSAAMAVSALHLQLRYGEKSDGLVTCRDAEVPGSVVVRPDRKL 299
                     K+PV++PL AAMA  A  LQ+RYGEKSDGLVT RDAEVPGS+VVRP RK+
Sbjct: 385 ----------KLPVMMPLGAAMAACAQLLQIRYGEKSDGLVTRRDAEVPGSIVVRPKRKM 434

Query: 300 DHAWMVYSSGKKDPNEPDCSEMCEALLTMLVELGMIK 336
           DHAWMVYSS   DP+E D S++CEALL +LVE+G  K
Sbjct: 435 DHAWMVYSSLNDDPSEGDASQVCEALLALLVEVGQKK 471