Jatropha Genome Database

JcCB0431461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0431461.10 - phase: 2 /pseudo/partial
         (125 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29726.m003903 heat shock protein 70kD, putative                        74   2e-14

>29726.m003903 heat shock protein 70kD, putative
          Length = 556

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/34 (97%), Positives = 34/34 (100%)

Query: 92  FNMKRLIGRVDTDPVVHASKSLPFLVQTLDIGVR 125
           FNMKRLIGRVDTDPVVHAS+SLPFLVQTLDIGVR
Sbjct: 91  FNMKRLIGRVDTDPVVHASRSLPFLVQTLDIGVR 124