Jatropha Genome Database

JcCB0430311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0430311.10 - phase: 2 /partial
         (356 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29917.m002028 uridine cytidine kinase I, putative                     602   e-173
30154.m001150 uridine cytidine kinase I, putative                     533   e-152
30190.m010949 Uracil phosphoribosyltransferase, putative              514   e-146
30068.m002669 phosphoribulose kinase, putative                         75   6e-14
30174.m009044 uridine cytidine kinase I, putative                      74   1e-13
30138.m003855 uridine cytidine kinase I, putative                      72   4e-13
29816.m000685 uridine cytidine kinase I, putative                      57   2e-08

>29917.m002028 uridine cytidine kinase I, putative
          Length = 462

 Score =  602 bits (1553), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 300/358 (83%), Positives = 317/358 (88%), Gaps = 2/358 (0%)

Query: 1   LSLQSNV--SISSPLHPPKQPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYH 58
           LSL SN+  SI S   P KQPFVIGVAGGTASGKTTVCN+IISQL DQGVLLINQDSFYH
Sbjct: 17  LSLHSNINASILSSPPPSKQPFVIGVAGGTASGKTTVCNLIISQLHDQGVLLINQDSFYH 76

Query: 59  SLSDEQLEKVQEYNFDHPGAFNTELLLSCMERLKNGHEVTIPNYDFKTHKSTLVGQKVNP 118
           SL+DEQL KV EYNFDHP +F+TELLLSCME+LK G  V IP+YDFK+HKST  G KVNP
Sbjct: 77  SLNDEQLAKVHEYNFDHPDSFHTELLLSCMEKLKQGQPVIIPSYDFKSHKSTGPGLKVNP 136

Query: 119 SDVIILEGILILHDPRVRELMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARF 178
           SDVII+EGIL+LHDPRVR+LMNMKIFV+TDSDLRLARRI+RDTVERGRNIQNVLDQYARF
Sbjct: 137 SDVIIIEGILVLHDPRVRDLMNMKIFVDTDSDLRLARRIQRDTVERGRNIQNVLDQYARF 196

Query: 179 VKPSFEEFILPSKKYADIIIPRGGDNAVAIDLIVQHIHTKLGQHDLCKIYPNVFVISSTF 238
           VKPSFEEFILPSKK+ADIIIP GGDN VAIDLIVQHI TKLGQH+LCKIYPNVFVI STF
Sbjct: 197 VKPSFEEFILPSKKHADIIIPWGGDNDVAIDLIVQHIQTKLGQHNLCKIYPNVFVIMSTF 256

Query: 239 QIRGMHTLIRDVKTTKHDFVFYADRLIRMVVEHGLGHLPFTERQITTPTGSIYPGVVFYK 298
           QIRGMHTLIRDVKT KHDFVFYADRLIR+VVEHGLGHLPFTERQ  TPTGSIYPGVVF K
Sbjct: 257 QIRGMHTLIRDVKTRKHDFVFYADRLIRLVVEHGLGHLPFTERQTRTPTGSIYPGVVFCK 316

Query: 299 RLCGVSVIRSGESMENALRACCXXXXXXXXXXXXXXSNGRQLIYEKLPADISSRHVLL 356
           RLCGVSVIRSGESMENALRACC              +NGRQLIYEKLPADISSRHVLL
Sbjct: 317 RLCGVSVIRSGESMENALRACCKGIKLGKILIHREGNNGRQLIYEKLPADISSRHVLL 374


>30154.m001150 uridine cytidine kinase I, putative
          Length = 482

 Score =  533 bits (1373), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 252/341 (73%), Positives = 295/341 (86%), Gaps = 1/341 (0%)

Query: 17  KQPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQLEKVQEYNFDHP 76
           KQPFVIGVAGG ASGKTTVC+MII QL DQ V+L+NQDSFY +L++E+L +V +YNFDHP
Sbjct: 46  KQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVNQDSFYQNLTEEELTRVHDYNFDHP 105

Query: 77  GAFNTELLLSCMERLKNGHEVTIPNYDFKTHKSTLV-GQKVNPSDVIILEGILILHDPRV 135
            AF+TE LL  ME+L++G  V IPNYDFK++K+ +   ++VNPSDVIILEGIL+ HD RV
Sbjct: 106 DAFDTEQLLCAMEKLRHGQAVDIPNYDFKSYKNDVFPARRVNPSDVIILEGILVFHDQRV 165

Query: 136 RELMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARFVKPSFEEFILPSKKYAD 195
           R+LMNMKIFV+TD+D+RLARRI+RDT E+GR+I  VLDQY++FVKP+F++FILP+KKYAD
Sbjct: 166 RDLMNMKIFVDTDADVRLARRIRRDTAEKGRDIGAVLDQYSKFVKPAFDDFILPTKKYAD 225

Query: 196 IIIPRGGDNAVAIDLIVQHIHTKLGQHDLCKIYPNVFVISSTFQIRGMHTLIRDVKTTKH 255
           IIIPRGGDN VA+DLIVQHI TKLGQHDLCKIYPN++VI STFQIRGMHTLIRD +TTKH
Sbjct: 226 IIIPRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDAQTTKH 285

Query: 256 DFVFYADRLIRMVVEHGLGHLPFTERQITTPTGSIYPGVVFYKRLCGVSVIRSGESMENA 315
           DFVFYADRLIR+VVEHGLGHLPFTE+Q+TTPTGS+Y GV F KRLCGVSVIRSGESMENA
Sbjct: 286 DFVFYADRLIRLVVEHGLGHLPFTEKQVTTPTGSVYTGVDFCKRLCGVSVIRSGESMENA 345

Query: 316 LRACCXXXXXXXXXXXXXXSNGRQLIYEKLPADISSRHVLL 356
           LRACC               NG+QLIYEKLP DIS+RHVLL
Sbjct: 346 LRACCKGIKIGKILIHREGDNGQQLIYEKLPQDISNRHVLL 386


>30190.m010949 Uracil phosphoribosyltransferase, putative
          Length = 481

 Score =  514 bits (1323), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/353 (69%), Positives = 293/353 (83%), Gaps = 1/353 (0%)

Query: 5   SNVSISSPLHPPKQPFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQ 64
           S+VS S+    PKQPFVIGV+GGTASGKTTVC+MII QL D  V+L+NQDSFY  L+ E+
Sbjct: 46  SSVSASTSPLAPKQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEE 105

Query: 65  LEKVQEYNFDHPGAFNTELLLSCMERLKNGHEVTIPNYDFKTHK-STLVGQKVNPSDVII 123
           LE+V EYNFDHP AF+TE LL C++ L++G    +P YDFK+H+ S+   ++VN SDVII
Sbjct: 106 LERVHEYNFDHPDAFDTEQLLDCIQTLRSGQPYQVPIYDFKSHRRSSDCFRQVNASDVII 165

Query: 124 LEGILILHDPRVRELMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARFVKPSF 183
           LEGIL+ HD RVR LMNMKIFV+TD+D+RLARRI+RDTVERGR+I +VL+QYA+FVKP+F
Sbjct: 166 LEGILVFHDQRVRSLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAF 225

Query: 184 EEFILPSKKYADIIIPRGGDNAVAIDLIVQHIHTKLGQHDLCKIYPNVFVISSTFQIRGM 243
           ++F+LPSKK+AD+IIPRGGDN VAIDLIV+HI TKLG HDLCKIYPNV VI STFQIRGM
Sbjct: 226 DDFVLPSKKFADVIIPRGGDNHVAIDLIVEHIRTKLGLHDLCKIYPNVCVIQSTFQIRGM 285

Query: 244 HTLIRDVKTTKHDFVFYADRLIRMVVEHGLGHLPFTERQITTPTGSIYPGVVFYKRLCGV 303
           HTLIRD + +KHDFVFY+DRLIR+VVEHGLGHLPFTE+Q+ TPT S+Y GV F K+LCGV
Sbjct: 286 HTLIRDKEISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTASVYTGVDFCKKLCGV 345

Query: 304 SVIRSGESMENALRACCXXXXXXXXXXXXXXSNGRQLIYEKLPADISSRHVLL 356
           S++RSGESMENALRACC               NG+QLIYEKLP DIS RHVLL
Sbjct: 346 SIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLL 398


>30068.m002669 phosphoribulose kinase, putative
          Length = 403

 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 25/200 (12%)

Query: 18  QPFVIGVAGGTASGKTTVCNMIISQLR-----------DQGVLLINQDSF-----YHSLS 61
           Q  VIG+A  +  GK+T    + S              D   L+ +  +      YHSL 
Sbjct: 58  QTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSL- 116

Query: 62  DEQLEKVQEYNFDHPGAFNTELLLSCMERLKNGHEVTIPNYDFKTHKSTLVG--QKVNPS 119
           D    K +      P A + +L+   ++ +K+G  V  P Y+   H + L+   + + P 
Sbjct: 117 DRTGRKEKGVTALDPRANDFDLMYEQVKAIKDGVAVEKPIYN---HVTGLLDPPELIKPP 173

Query: 120 DVIILEGILILHDPRVRELMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQY-ARF 178
            ++++EG+  ++D RVR+L++  I+++  ++++ A +I+RD  ERG +++++     AR 
Sbjct: 174 KILVIEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEAR- 232

Query: 179 VKPSFEEFILPSKKYADIII 198
            KP F+ +I P K+YAD +I
Sbjct: 233 -KPDFDAYIDPQKQYADAVI 251


>30174.m009044 uridine cytidine kinase I, putative
          Length = 657

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 14/181 (7%)

Query: 21  VIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQLEKVQEYNFDHPGAFN 80
           ++GVAG + +GKT     + + +    + +I  D++  +       ++ + NFD P   +
Sbjct: 68  LVGVAGPSGAGKTVFTEKVFNFM--PSIAVITMDNYNDA------SRIIDGNFDDPRLTD 119

Query: 81  TELLLSCMERLKNGHEVTIPNYDFKTHKSTLVGQK---VNPSDVIILEGILILHDPRVRE 137
            + LL  +  LK G  V +P YDFKT  S+ VG +   V  S ++I+EGI  L + R+R 
Sbjct: 120 YDTLLENIHGLKAGKAVQVPLYDFKT--SSRVGYRTVEVPASRIVIIEGIYALSE-RLRP 176

Query: 138 LMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARFVKPSFEEFILPSKKYADII 197
           L+++++ +       L +R+ RD    G+  + ++ Q +  V P ++ FI P  + A I 
Sbjct: 177 LLDLRVSITGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLRTAHIK 236

Query: 198 I 198
           I
Sbjct: 237 I 237


>30138.m003855 uridine cytidine kinase I, putative
          Length = 657

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 97/181 (53%), Gaps = 14/181 (7%)

Query: 21  VIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQLEKVQEYNFDHPGAFN 80
           ++G+AG + +GKT     ++  +    V +I+ D++  S       ++ + NFD P   +
Sbjct: 67  LVGLAGPSGAGKTVFTEKVLHFM--PSVAVISMDNYNDS------SRIVDGNFDDPRLTD 118

Query: 81  TELLLSCMERLKNGHEVTIPNYDFKTHKSTLVGQK---VNPSDVIILEGILILHDPRVRE 137
            + LL  ++ LK+G  V +P YDFK+  S+ +G +   V  S ++I+EGI  L + ++R 
Sbjct: 119 YDTLLKNVQDLKSGKAVEVPIYDFKS--SSRIGYRTLEVPTSRIVIIEGIYALSE-KLRP 175

Query: 138 LMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARFVKPSFEEFILPSKKYADII 197
           ++++++ V       L +R+ RD    G+  + ++ Q +  V P ++ FI P  + A I 
Sbjct: 176 MLDLRVSVTGGVHFDLVKRVLRDIQRAGQAPEEIIQQISETVYPMYKAFIEPDLQTAHIK 235

Query: 198 I 198
           I
Sbjct: 236 I 236


>29816.m000685 uridine cytidine kinase I, putative
          Length = 975

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 16/222 (7%)

Query: 19  PFVIGVAGGTASGKTTVCNMIISQLRDQGVLLINQDSFYHSLSDEQLEKVQEYNFDHPGA 78
           P ++G+ G + SGKT++ + + + +   G  +++ +S++ S      E+V+++  D   +
Sbjct: 477 PVIVGIGGPSGSGKTSLAHKMANIV---GCEVVSLESYFIS------EQVKDFKHDDFRS 527

Query: 79  FNTELLLSCMERLKNGHEVTIPNYDFKTHKSTLVGQKVNPSD--VIILEGILILHDPRVR 136
            +  LL   ++ +K+G    +P +D +T   +   +     D  VI+ EG+  LH P +R
Sbjct: 528 LDLSLLAKNIDDIKHGRRTKVPIFDLETGARSGFKELGVSEDCGVIVFEGVYALH-PEIR 586

Query: 137 ELMNMKIFVETDSDLRLARRIKRDTVERGRNIQNVLDQYARFVKPSFEEFILPSKKYADI 196
           + ++  I V       L  R++RD    G  +    ++    V P F++ I P   +AD+
Sbjct: 587 KSLDFWIAVVGGVHSHLIARVQRDKSRVGCFMSQ--NEIMMTVFPMFQQHIEPHLVHADL 644

Query: 197 IIPRGGDNAVAID--LIVQHIHTKLGQHDLCKIYPNVFVISS 236
            I    D  ++ +  L V   + ++   D+ KI  +    SS
Sbjct: 645 KIRNDFDPVLSPESSLFVLKSNKQVSDQDILKILDSAKFCSS 686